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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 62.1
Min RPKM: 15.8
Std RPKM: 10.1
Median RPKM: 29.7
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
62.1
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
59.1
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
54.0
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
53.7
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
52.9
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
52.2
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
52.2
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
50.9
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
50.5
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
48.5
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
44.3
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
44.0
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
43.6
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
42.7
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
42.6
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
40.9
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
40.2
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
39.8
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
39.7
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
39.7
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
39.1
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
39.1
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
38.6
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
38.3
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
37.7
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
36.2
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
35.6
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
34.9
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
34.6
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
34.6
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
34.5
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
34.1
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
34.0
GTEX-QCQG-1226-SM-48U23
50-59 years, female
33.9
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
33.8
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
33.7
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
33.7
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
33.6
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
32.7
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
32.1
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
32.1
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
31.5
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
31.4
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
31.2
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
30.9
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
30.2
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
30.1
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
29.8
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
29.6
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
29.5
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
29.2
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
28.7
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
28.6
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
28.5
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
28.2
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
27.7
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
27.7
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
27.1
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
26.9
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
26.6
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
26.5
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
26.4
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
26.4
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
26.3
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
26.1
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
26.0
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
25.8
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
25.6
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
25.4
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
25.3
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
25.2
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
24.9
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
24.9
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
24.9
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
24.6
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
24.2
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
24.1
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
23.4
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
22.9
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
22.7
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
22.6
GTEX-S341-1226-SM-4AD5S
40-49 years, female
22.3
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
22.3
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
22.0
GTEX-11I78-2026-SM-5987C
50-59 years, female
21.6
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
21.4
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
21.2
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
21.1
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
19.4
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
18.5
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
17.7
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
17.3
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
17.2
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
16.4
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
16.3
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
15.8
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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