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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 31.1
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 0.8
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 5.2
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 12.1
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 6.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 39.3
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 13.2
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 30.1
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 144.0
Min RPKM: 5.0
Std RPKM: 34.0
Median RPKM: 47.2
GTEX-RN64-1826-SM-48FDV
50-59 years, male
144.0
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
138.9
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
134.7
GTEX-YECK-1926-SM-4W21H
60-69 years, male
128.8
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
128.7
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
119.1
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
117.7
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
117.3
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
116.9
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
115.8
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
109.1
GTEX-QESD-2026-SM-447BI
20-29 years, male
101.8
GTEX-13112-1426-SM-5EGH8
50-59 years, male
99.1
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
98.7
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
96.2
GTEX-11GSP-0626-SM-5986T
60-69 years, female
95.9
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
94.7
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
90.9
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
90.2
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
89.7
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
89.6
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
89.4
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
88.3
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
87.0
GTEX-11ZUS-2526-SM-59872
30-39 years, male
85.0
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
84.8
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
83.2
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
79.6
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
79.6
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
77.2
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
76.9
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
76.4
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
76.1
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
75.1
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
73.7
GTEX-1399T-0826-SM-5IFES
60-69 years, male
72.1
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
70.3
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
66.2
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
64.2
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
63.3
GTEX-X261-1726-SM-4PQYT
50-59 years, male
62.8
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
62.6
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
60.8
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
58.6
GTEX-R53T-0326-SM-48FEC
50-59 years, female
58.2
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
58.1
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
58.0
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
56.7
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
54.0
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
53.2
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
52.7
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
51.6
GTEX-RU72-1426-SM-46MUF
50-59 years, female
51.2
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
50.7
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
48.0
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
48.0
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
47.9
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
47.5
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
47.3
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
47.2
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
45.4
GTEX-S33H-1626-SM-4AD68
30-39 years, male
45.0
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
44.2
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
44.0
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
43.6
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
42.7
GTEX-P78B-1326-SM-3P611
40-49 years, female
42.4
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
42.3
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
41.8
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
41.5
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
41.2
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
40.0
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
39.8
GTEX-12696-0826-SM-5EGGE
60-69 years, male
38.8
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
38.6
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
36.2
GTEX-Q734-0326-SM-48U15
40-49 years, female
35.2
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
35.1
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
34.8
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
34.8
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
33.2
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
32.1
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
32.0
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
29.5
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
29.3
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
28.2
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
27.6
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
26.8
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
26.6
GTEX-REY6-1226-SM-48FDR
60-69 years, male
25.2
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
25.0
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
24.5
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
23.6
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
23.4
GTEX-13113-1326-SM-5GCOI
60-69 years, female
22.9
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
22.8
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
22.6
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
22.5
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
21.2
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
19.6
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
18.7
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
18.6
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
18.1
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
18.1
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
18.1
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
17.9
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
17.5
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
16.5
GTEX-QEL4-1226-SM-447A4
50-59 years, male
14.7
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
14.5
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
12.2
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
8.5
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
8.3
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
7.7
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
7.4
GTEX-S32W-1926-SM-4AD63
50-59 years, female
7.0
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
6.3
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
5.8
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
5.0
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
