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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 261
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 274.8
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 171.8
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 317.9
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 338.6
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 258.2
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 192.2
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 273.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 268.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 290.6
Min RPKM: 94.7
Std RPKM: 43.5
Median RPKM: 195.4
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
290.6
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
289.4
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
284.0
GTEX-13112-0226-SM-5P9IV
50-59 years, male
280.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
276.9
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
275.6
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
273.2
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
271.5
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
269.0
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
268.7
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
265.3
GTEX-REY6-0126-SM-48FDT
60-69 years, male
264.9
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
262.0
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
256.9
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
256.1
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
254.9
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
252.0
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
247.2
GTEX-Y111-2426-SM-4TT23
50-59 years, male
247.0
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
246.7
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
243.7
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
243.5
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
240.4
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
240.4
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
238.0
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
235.5
GTEX-117XS-2026-SM-5GID1
60-69 years, male
235.2
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
234.5
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
233.5
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
232.5
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
229.4
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
228.0
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
227.2
GTEX-11OF3-1826-SM-5987N
60-69 years, male
226.2
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
226.1
GTEX-S95S-1126-SM-4B64E
60-69 years, male
225.7
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
224.7
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
224.5
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
224.1
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
222.5
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
221.4
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
220.3
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
220.2
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
220.1
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
220.1
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
218.4
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
218.1
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
216.1
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
216.0
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
215.3
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
213.8
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
213.2
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
212.7
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
212.6
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
212.3
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
212.1
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
211.5
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
210.3
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
210.2
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
210.0
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
210.0
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
208.9
GTEX-QLQW-1026-SM-447A9
30-39 years, male
208.4
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
206.7
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
205.6
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
205.5
GTEX-12696-0226-SM-5EGL3
60-69 years, male
205.5
GTEX-11DXZ-2126-SM-59881
50-59 years, male
204.6
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
204.3
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
204.2
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
203.7
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
202.8
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
202.1
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
202.0
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
201.9
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
201.6
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
201.4
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
201.3
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
201.0
GTEX-V955-1926-SM-4KL1L
60-69 years, male
200.4
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
200.1
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
200.0
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
199.4
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
198.6
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
197.8
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
196.2
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
194.7
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
194.2
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
193.8
GTEX-13111-1526-SM-5EGJX
50-59 years, male
191.7
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
191.5
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
191.0
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
190.8
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
190.7
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
190.6
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
190.5
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
189.9
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
189.4
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
189.2
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
189.2
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
189.1
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
188.4
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
188.0
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
187.6
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
186.3
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
185.7
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
185.3
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
185.0
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
185.0
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
184.6
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
184.0
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
183.3
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
183.2
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
183.1
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
183.1
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
182.8
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
181.9
GTEX-R55C-1426-SM-48FED
40-49 years, male
180.9
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
180.6
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
177.4
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
177.3
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
176.7
GTEX-R55D-0126-SM-48FEL
50-59 years, male
176.3
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
175.8
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
173.2
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
172.4
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
172.3
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
171.3
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
171.2
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
170.0
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
166.7
GTEX-X261-2326-SM-4PQYU
50-59 years, male
166.7
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
164.7
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
164.6
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
162.6
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
161.9
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
161.8
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
156.2
GTEX-XPT6-1626-SM-4B655
20-29 years, male
154.1
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
151.4
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
150.7
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
147.1
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
146.4
GTEX-S33H-0126-SM-4AD62
30-39 years, male
145.7
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
145.2
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
145.2
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
138.7
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
136.3
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
134.1
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
132.8
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
130.9
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
130.8
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
130.8
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
127.3
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
126.6
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
126.5
GTEX-RN64-2326-SM-48FDW
50-59 years, male
126.3
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
125.0
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
123.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
120.5
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
120.5
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
118.6
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
118.4
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
117.3
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
115.2
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
112.3
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
110.0
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
108.9
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
104.9
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
98.9
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
98.5
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
94.7
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.