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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 791.0
Min RPKM: 266.2
Std RPKM: 94.1
Median RPKM: 414.8
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
791.0
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
726.7
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
657.5
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
634.1
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
630.2
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
571.8
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
564.7
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
550.8
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
549.6
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
547.2
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
545.7
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
538.2
GTEX-RU72-2226-SM-46MUE
50-59 years, female
531.3
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
529.3
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
526.2
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
525.5
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
516.0
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
514.1
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
497.3
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
490.4
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
486.2
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
485.4
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
479.6
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
469.3
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
466.9
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
465.3
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
459.5
GTEX-S32W-1226-SM-4AD67
50-59 years, female
458.4
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
449.4
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
449.1
GTEX-S341-0726-SM-4AD5R
40-49 years, female
444.6
GTEX-P78B-1926-SM-3P616
40-49 years, female
443.0
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
440.6
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
439.9
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
438.5
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
437.9
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
437.8
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
436.0
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
434.6
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
429.3
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
427.1
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
423.6
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
421.0
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
419.8
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
419.7
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
418.6
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
416.5
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
415.1
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
414.8
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
412.4
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
408.1
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
403.1
GTEX-QCQG-1426-SM-48U22
50-59 years, female
403.0
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
402.4
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
400.8
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
398.8
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
397.9
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
396.4
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
395.8
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
394.9
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
393.4
GTEX-11I78-1926-SM-59878
50-59 years, female
390.4
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
390.0
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
385.8
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
383.7
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
382.6
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
378.6
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
378.1
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
375.1
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
373.4
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
371.8
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
370.1
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
369.7
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
368.7
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
364.2
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
362.9
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
362.7
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
361.9
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
356.3
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
350.0
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
344.6
GTEX-Q734-0726-SM-48TZP
40-49 years, female
344.0
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
337.7
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
327.3
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
319.2
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
318.7
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
315.2
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
311.5
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
311.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
305.7
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
305.0
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
304.9
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
299.5
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
298.8
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
298.2
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
278.3
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
266.2
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.