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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1997.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1795.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 1600.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1080.3
Min RPKM: 102.8
Std RPKM: 109.5
Median RPKM: 213.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1080.3
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
732.2
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
686.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
642.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
623.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
449.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
412.2
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
402.9
GTEX-QEL4-2126-SM-447AE
50-59 years, male
400.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
394.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
390.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
387.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
384.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
381.8
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
377.9
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
376.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
370.9
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
365.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
365.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
359.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
358.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
357.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
353.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
346.4
GTEX-1192X-2326-SM-5987X
50-59 years, male
341.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
339.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
337.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
336.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
319.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
318.8
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
310.2
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
307.4
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
307.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
306.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
306.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
303.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
300.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
300.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
300.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
297.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
290.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
286.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
285.7
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
285.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
284.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
279.3
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
279.0
GTEX-S341-1526-SM-4AD6K
40-49 years, female
277.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
274.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
274.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
272.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
271.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
269.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
268.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
264.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
263.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
259.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
258.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
257.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
256.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
254.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
254.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
253.8
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
251.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
251.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
250.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
249.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
247.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
246.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
246.4
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
244.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
243.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
243.4
GTEX-13113-1726-SM-5GCOO
60-69 years, female
239.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
238.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
237.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
237.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
236.3
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
236.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
235.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
235.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
235.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
235.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
235.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
234.1
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
233.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
231.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
230.6
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
230.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
230.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
229.6
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
229.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
229.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
226.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
225.2
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
224.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
223.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
223.3
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
222.6
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
222.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
220.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
217.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
216.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
216.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
214.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
214.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
214.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
212.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
212.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
211.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
210.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
209.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
209.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
209.0
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
208.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
208.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
208.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
207.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
206.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
206.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
205.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
205.3
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
204.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
202.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
200.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
200.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
199.6
GTEX-11EI6-0626-SM-5985T
60-69 years, male
198.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
197.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
197.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
197.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
196.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
196.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
195.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
195.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
195.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
192.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
192.2
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
191.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
191.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
191.0
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
190.8
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
190.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
190.4
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
190.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
188.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
186.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
185.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
184.3
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
183.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
180.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
179.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
178.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
176.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
176.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
175.6
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
173.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
170.8
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
170.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
170.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
169.1
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
169.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
168.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
168.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
167.9
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
167.7
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
167.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
167.3
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
166.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
166.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
166.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
165.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
165.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
164.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
162.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
159.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
159.3
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
158.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
158.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
157.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
157.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
155.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
153.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
152.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
152.2
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
152.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
151.6
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
150.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
148.5
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
148.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
145.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
145.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
144.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
143.9
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
142.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
142.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
140.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
139.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
139.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
138.8
GTEX-R53T-1526-SM-48FEK
50-59 years, female
138.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
135.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
131.1
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
130.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
129.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
128.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
128.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
121.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
121.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
118.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
118.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
104.2
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
103.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
102.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.