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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 163.1
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 235.2
Min RPKM: 43.2
Std RPKM: 43.0
Median RPKM: 153.4
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
235.2
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
229.1
GTEX-WL46-2926-SM-3LK82
50-59 years, male
217.2
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
214.9
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
202.8
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
202.7
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
202.6
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
200.6
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
199.9
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
196.9
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
195.7
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
195.4
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
195.3
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
193.9
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
192.3
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
191.2
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
190.7
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
190.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
190.5
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
190.4
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
188.4
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
188.1
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
187.0
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
186.5
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
185.3
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
185.0
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
184.7
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
183.9
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
182.2
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
180.7
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
178.9
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
178.8
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
176.9
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
173.8
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
173.3
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
172.3
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
171.9
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
171.8
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
171.5
GTEX-11PRG-2926-SM-5987A
50-59 years, male
169.1
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
167.3
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
165.0
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
163.6
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
162.1
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
161.2
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
160.0
GTEX-X585-3026-SM-46MWF
50-59 years, male
159.5
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
158.5
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
157.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
157.0
GTEX-145MF-2726-SM-5O995
50-59 years, male
156.9
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
156.7
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
155.6
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
155.4
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
155.2
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
154.7
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
153.8
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
153.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
152.1
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
151.6
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
150.9
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
150.2
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
149.8
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
149.5
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
147.6
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
145.3
GTEX-1128S-2726-SM-5H12C
60-69 years, female
145.1
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
145.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
144.7
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
144.6
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
142.5
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
141.9
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
141.5
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
139.4
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
139.3
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
138.9
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
138.4
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
138.2
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
135.8
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
134.7
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
133.0
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
132.8
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
129.5
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
126.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
125.5
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
125.3
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
125.2
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
123.9
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
123.1
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
123.0
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
121.3
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
119.9
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
118.7
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
111.0
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
107.1
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
103.6
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
93.6
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
90.3
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
87.0
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
85.8
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
85.5
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
83.4
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
81.2
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
78.9
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
72.9
GTEX-144FL-3026-SM-5O99C
50-59 years, male
72.1
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
60.0
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
58.1
GTEX-11GSP-3226-SM-5986O
60-69 years, female
54.1
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
53.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
51.8
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
51.6
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
50.9
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
43.2
Show all
Brain - Frontal Cortex (BA9) RPKM: 130.5
Samples: 108
Max RPKM: 213.0
Min RPKM: 30.5
Std RPKM: 44.5
Median RPKM: 143.7
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
213.0
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
209.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
201.2
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
188.7
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
186.6
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
184.2
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
183.7
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
183.5
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
182.3
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
181.3
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
179.1
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
178.3
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
174.8
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
173.1
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
173.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
169.5
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
168.6
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
168.3
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
168.3
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
167.2
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
167.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
164.9
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
164.1
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
163.8
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
163.5
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
163.4
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
163.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
162.6
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
162.3
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
160.4
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
160.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
159.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
158.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
158.5
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
158.0
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
157.5
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
157.4
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
156.5
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
155.6
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
155.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
155.1
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
154.1
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
153.7
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
153.3
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
151.9
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
151.4
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
150.4
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
148.9
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
147.6
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
147.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
146.3
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
145.3
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
144.5
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
143.7
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
143.7
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
143.6
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
137.9
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
137.7
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
137.3
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
137.3
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
136.0
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
134.4
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
132.4
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
131.2
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
131.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
127.6
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
127.6
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
127.0
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
126.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
123.3
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
122.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
122.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
121.7
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
121.7
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
118.5
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
117.5
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
117.1
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
116.4
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
115.0
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
108.0
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
101.3
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
99.5
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
97.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
96.2
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
96.0
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
95.3
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
92.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
91.3
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
81.1
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
78.2
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
76.0
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
72.5
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
72.4
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
70.8
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
60.1
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
56.1
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
48.8
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
48.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
46.5
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
45.8
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
45.5
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
42.8
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
41.6
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
41.6
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
39.7
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
38.8
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
35.2
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
30.5
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.