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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 724.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 485.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 236
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 1076.9
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 942.7
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 657
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 1594.9
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 915.1
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 1546
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 965.0
Min RPKM: 76.4
Std RPKM: 183.7
Median RPKM: 519.4
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
965.0
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
963.1
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
953.3
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
935.9
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
884.7
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
875.2
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
852.6
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
850.8
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
845.8
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
807.7
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
800.4
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
797.8
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
791.2
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
770.0
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
759.2
GTEX-Y111-2426-SM-4TT23
50-59 years, male
759.0
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
757.3
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
754.2
GTEX-13112-0226-SM-5P9IV
50-59 years, male
753.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
753.1
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
741.5
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
737.1
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
725.2
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
725.0
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
724.1
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
724.0
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
715.4
GTEX-117XS-2026-SM-5GID1
60-69 years, male
714.9
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
714.0
GTEX-11OF3-1826-SM-5987N
60-69 years, male
712.8
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
705.9
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
700.6
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
698.6
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
691.2
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
687.9
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
686.0
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
685.2
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
680.8
GTEX-REY6-0126-SM-48FDT
60-69 years, male
680.2
GTEX-11DXZ-2126-SM-59881
50-59 years, male
679.8
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
678.2
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
677.6
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
673.7
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
670.7
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
668.7
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
668.1
GTEX-13111-1526-SM-5EGJX
50-59 years, male
666.3
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
661.9
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
641.0
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
635.1
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
633.3
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
631.2
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
628.5
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
623.7
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
620.8
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
619.0
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
618.4
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
615.5
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
615.1
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
609.1
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
603.9
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
599.9
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
593.7
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
589.1
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
588.8
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
585.0
GTEX-12696-0226-SM-5EGL3
60-69 years, male
577.2
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
573.0
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
572.7
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
569.8
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
563.0
GTEX-R55D-0126-SM-48FEL
50-59 years, male
559.6
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
553.6
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
553.4
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
551.5
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
545.8
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
534.9
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
534.7
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
532.4
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
532.2
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
530.8
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
530.3
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
525.9
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
522.8
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
522.8
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
520.7
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
518.1
GTEX-V955-1926-SM-4KL1L
60-69 years, male
512.7
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
511.7
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
511.4
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
509.5
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
508.3
GTEX-S95S-1126-SM-4B64E
60-69 years, male
507.8
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
506.4
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
503.5
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
484.2
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
482.0
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
480.7
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
479.7
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
477.4
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
475.4
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
473.0
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
472.1
GTEX-QLQW-1026-SM-447A9
30-39 years, male
468.1
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
465.8
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
457.4
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
456.4
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
452.3
GTEX-X261-2326-SM-4PQYU
50-59 years, male
444.7
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
443.4
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
442.0
GTEX-R55C-1426-SM-48FED
40-49 years, male
441.0
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
436.9
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
435.7
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
433.9
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
432.1
GTEX-XPT6-1626-SM-4B655
20-29 years, male
431.8
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
428.9
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
427.0
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
425.2
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
423.6
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
423.2
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
422.8
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
419.5
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
417.6
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
415.1
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
402.9
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
397.8
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
397.5
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
396.0
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
384.4
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
378.1
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
377.2
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
375.6
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
370.0
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
368.5
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
367.5
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
360.5
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
355.3
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
350.6
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
337.0
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
325.0
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
321.6
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
320.8
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
316.9
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
311.8
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
307.6
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
307.0
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
306.6
GTEX-RN64-2326-SM-48FDW
50-59 years, male
297.1
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
289.0
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
287.3
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
281.2
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
276.2
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
274.7
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
274.3
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
273.6
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
271.4
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
270.6
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
269.7
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
267.9
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
261.3
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
259.1
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
256.6
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
248.5
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
236.3
GTEX-S33H-0126-SM-4AD62
30-39 years, male
216.7
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
179.1
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
178.2
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
156.3
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
154.4
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
76.4
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.