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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 2.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 0
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 0
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 291.5
Min RPKM: 0.0
Std RPKM: 56.3
Median RPKM: 17.7
GTEX-R53T-1526-SM-48FEK
50-59 years, female
291.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
291.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
287.6
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
238.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
234.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
209.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
193.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
178.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
174.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
163.2
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
162.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
153.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
151.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
150.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
146.5
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
145.4
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
145.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
131.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
130.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
120.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
116.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
112.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
109.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
105.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
103.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
98.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
98.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
96.2
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
95.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
95.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
92.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
90.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
79.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
78.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
77.9
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
76.4
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
72.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
69.7
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
69.6
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
65.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
65.5
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
63.9
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
63.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
62.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
61.7
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
60.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
60.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
60.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
59.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
58.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
57.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
53.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
53.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
52.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
50.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
49.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
48.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
46.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
46.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
45.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
44.5
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
43.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
43.6
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
42.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
41.8
GTEX-13113-1726-SM-5GCOO
60-69 years, female
41.7
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
41.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
40.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
39.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
38.9
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
37.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
36.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
36.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
35.7
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
33.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
32.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
31.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
31.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
30.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
29.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
28.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
28.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
27.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
27.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
26.2
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
23.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
22.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
22.4
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
22.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
21.9
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
21.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
21.7
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
20.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
20.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
20.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
20.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
20.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
19.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
19.7
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
19.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
19.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
19.0
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
18.9
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
18.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
17.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
17.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
17.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
17.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
17.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
17.5
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
17.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
17.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
16.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
15.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
15.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
15.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
15.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
15.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
15.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
15.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
14.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
14.8
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
14.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
14.0
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
13.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
13.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
11.6
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
11.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
11.1
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
11.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
11.1
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
10.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
10.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
9.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
9.1
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
9.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
8.7
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
8.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
8.6
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
7.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
7.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
7.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
7.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
7.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
6.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
6.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
6.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
6.2
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
6.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
5.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
5.2
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
5.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
5.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
4.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
4.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
4.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
4.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
4.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
3.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
3.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
3.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
3.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
3.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
2.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
2.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
2.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
2.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
2.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
2.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
2.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
1.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
1.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
1.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
1.6
GTEX-XBED-1626-SM-47JYN
60-69 years, male
1.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
1.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
1.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
1.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
1.0
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
1.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
0.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
0.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
0.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
0.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
0.7
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
0.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
0.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
0.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
0.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
0.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
0.5
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
0.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
0.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
0.5
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
0.4
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
0.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
0.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
0.3
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
0.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
0.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
0.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
0.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
0.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
0.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
0.2
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
0.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
0.1
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
0.1
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
0.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
0.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
0.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
0.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.