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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 201.1
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 134.2
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 76.6
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 350.9
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 306.5
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 213.9
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 519.1
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 249.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 567.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 442.1
Min RPKM: 38.2
Std RPKM: 78.7
Median RPKM: 209.7
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
442.1
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
399.0
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
380.9
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
379.5
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
372.0
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
366.0
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
362.7
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
362.5
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
355.2
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
338.7
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
332.4
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
322.9
GTEX-13112-0226-SM-5P9IV
50-59 years, male
319.0
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
316.3
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
312.2
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
310.9
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
310.0
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
305.8
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
305.7
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
300.8
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
295.2
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
287.3
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
282.6
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
282.5
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
282.1
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
282.1
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
282.0
GTEX-11DXZ-2126-SM-59881
50-59 years, male
281.3
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
279.0
GTEX-REY6-0126-SM-48FDT
60-69 years, male
278.3
GTEX-11OF3-1826-SM-5987N
60-69 years, male
275.6
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
275.1
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
274.0
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
270.9
GTEX-Y111-2426-SM-4TT23
50-59 years, male
264.8
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
264.7
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
263.3
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
261.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
260.3
GTEX-13111-1526-SM-5EGJX
50-59 years, male
260.3
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
256.4
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
256.0
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
255.6
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
255.5
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
255.3
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
254.1
GTEX-117XS-2026-SM-5GID1
60-69 years, male
253.2
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
252.3
GTEX-S95S-1126-SM-4B64E
60-69 years, male
251.8
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
248.4
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
248.0
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
247.0
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
246.0
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
244.8
GTEX-12696-0226-SM-5EGL3
60-69 years, male
244.6
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
244.1
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
244.1
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
242.6
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
242.5
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
240.1
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
238.4
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
233.5
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
233.5
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
232.2
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
231.1
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
228.4
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
228.2
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
227.4
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
226.8
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
226.6
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
226.2
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
225.2
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
224.8
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
223.4
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
221.3
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
220.9
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
220.4
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
220.3
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
219.8
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
217.5
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
216.4
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
214.9
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
213.1
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
211.9
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
210.9
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
210.2
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
209.1
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
208.9
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
206.4
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
205.8
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
204.1
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
201.0
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
199.3
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
198.8
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
197.8
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
196.5
GTEX-R55D-0126-SM-48FEL
50-59 years, male
195.6
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
194.3
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
191.2
GTEX-R55C-1426-SM-48FED
40-49 years, male
190.2
GTEX-V955-1926-SM-4KL1L
60-69 years, male
189.0
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
188.4
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
188.0
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
185.4
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
181.5
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
178.4
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
178.1
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
177.6
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
177.5
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
176.7
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
176.4
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
176.4
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
176.2
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
169.0
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
168.5
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
168.1
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
167.3
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
166.5
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
165.7
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
165.2
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
165.1
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
159.8
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
157.8
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
157.1
GTEX-XPT6-1626-SM-4B655
20-29 years, male
156.3
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
155.3
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
154.6
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
154.3
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
154.0
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
152.4
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
152.2
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
146.4
GTEX-QLQW-1026-SM-447A9
30-39 years, male
141.5
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
136.5
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
135.5
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
129.7
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
127.7
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
124.2
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
123.3
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
123.0
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
122.7
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
122.7
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
120.7
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
118.0
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
118.0
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
117.9
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
117.7
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
116.1
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
114.5
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
112.4
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
111.5
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
111.3
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
110.1
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
108.4
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
105.2
GTEX-X261-2326-SM-4PQYU
50-59 years, male
103.9
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
101.6
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
99.3
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
98.7
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
88.5
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
86.3
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
85.6
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
84.3
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
79.1
GTEX-S33H-0126-SM-4AD62
30-39 years, male
72.8
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
68.2
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
67.0
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
66.3
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
62.9
GTEX-RN64-2326-SM-48FDW
50-59 years, male
54.3
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
52.1
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
38.2
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.