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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 51.2
Min RPKM: 19.5
Std RPKM: 5.2
Median RPKM: 26.6
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
51.2
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
38.3
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
37.6
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
35.8
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
34.2
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
33.9
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
33.5
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
32.5
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
32.5
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
32.0
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
31.2
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
31.0
GTEX-X261-2426-SM-4PQZU
50-59 years, male
30.9
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
30.9
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
30.8
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
30.5
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
29.7
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
29.7
GTEX-11P82-0926-SM-5986X
20-29 years, male
29.6
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
29.5
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
29.2
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
29.2
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
29.2
GTEX-13113-1526-SM-5EGHV
60-69 years, female
28.5
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
27.8
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
27.5
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
26.9
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
26.7
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
26.6
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
26.6
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
26.1
GTEX-13O21-1926-SM-5MR39
50-59 years, male
26.1
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
26.0
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
25.8
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
25.7
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
25.6
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
25.2
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
25.1
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
25.1
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
24.8
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
24.5
GTEX-1445S-2926-SM-5O993
60-69 years, male
24.3
GTEX-Y111-2626-SM-4TT24
50-59 years, male
23.9
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
23.6
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
23.6
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
23.5
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
23.2
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
23.2
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
23.1
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
23.1
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
23.0
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
23.0
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
22.7
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
22.5
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
22.1
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
19.9
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
19.5
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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