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COLON - Expression summary
RNA expressioni
HPA:66.1TPM
GTEx:46.2RPKM
FANTOM5:198.4Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 66.1
overview Male, age 54 Sample 1
TPM: 81.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 62
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 78.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 50.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 46.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 74.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 68
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 65.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 57.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 76.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 92.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 61.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 44.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 46.2
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 39.3
Samples: 149

Max RPKM: 63.7
Min RPKM: 18.7
Std RPKM: 7.5
Median RPKM: 38.3
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 63.7
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 61.8
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 60.0
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 58.4
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 57.9
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 56.3
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 54.9
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 53.4
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 51.2
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 50.7
Show all
Colon - Transverse
RPKM: 51.4
Samples: 196

Max RPKM: 93.2
Min RPKM: 21.5
Std RPKM: 11.4
Median RPKM: 49.8
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 93.2
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 80.1
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 78.6
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 78.5
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 76.5
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 75.6
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 75.4
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 73.7
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 73.6
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 72.7
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 198.4
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 148.9
FF:10014-101C5 62,83,84 years, mixed 198.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.