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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 473
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 153.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 295.8
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 565.4
Min RPKM: 1.3
Std RPKM: 85.4
Median RPKM: 39.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
565.4
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
562.5
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
352.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
345.3
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
336.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
329.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
319.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
307.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
287.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
219.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
219.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
217.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
187.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
186.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
186.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
183.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
172.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
169.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
163.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
161.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
161.0
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
161.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
159.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
159.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
156.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
155.2
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
152.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
146.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
146.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
139.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
136.1
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
136.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
123.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
122.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
122.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
122.1
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
119.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
119.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
118.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
117.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
116.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
115.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
110.8
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
110.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
109.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
109.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
108.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
108.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
107.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
106.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
106.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
105.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
105.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
103.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
102.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
98.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
94.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
92.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
90.7
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
89.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
87.4
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
87.2
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
84.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
84.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
81.4
GTEX-11EI6-0626-SM-5985T
60-69 years, male
79.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
79.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
79.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
75.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
73.2
GTEX-S341-1526-SM-4AD6K
40-49 years, female
71.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
70.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
69.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
68.3
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
61.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
61.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
60.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
60.5
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
59.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
58.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
54.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
54.0
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
51.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
50.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
49.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
48.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
48.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
48.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
47.3
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
47.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
46.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
46.5
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
46.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
44.8
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
44.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
43.1
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
43.0
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
42.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
42.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
42.6
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
42.4
GTEX-T6MN-0726-SM-32PML
50-59 years, male
42.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
42.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
40.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
40.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
40.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
39.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
38.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
38.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
38.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
38.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
37.6
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
37.6
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
37.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
37.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
35.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
33.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
32.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
32.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
31.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
31.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
31.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
31.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
30.4
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
30.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
30.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
29.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
29.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
29.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
28.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
27.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
27.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
27.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
27.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
24.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
24.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
24.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
24.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
23.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
22.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
22.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
20.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
20.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
20.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
20.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
20.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
20.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
19.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
19.8
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
19.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
19.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
17.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
17.1
GTEX-11OF3-1926-SM-59889
60-69 years, male
17.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
17.0
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
16.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
16.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
15.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
15.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
15.7
GTEX-R55D-0826-SM-48FEA
50-59 years, male
15.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
14.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
13.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
13.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
13.7
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
13.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
12.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
12.8
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
12.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
12.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
11.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
11.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
11.5
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
11.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
10.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
10.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
10.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
10.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
10.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
9.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
9.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
8.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
8.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
8.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
8.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
7.8
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
7.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
7.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
7.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
7.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
7.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
6.9
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
6.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
6.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
6.2
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
5.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
5.1
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
5.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
4.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
4.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
4.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
4.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
4.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
4.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
3.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
3.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
3.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
2.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
2.6
GTEX-144GM-0926-SM-5O994
20-29 years, male
2.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
2.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
2.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
1.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
1.3
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.