Fields »
ABOUTMENU
HELP
NEWS
MXD4
COLON - Expression summary
RNA expressioni
HPA:12.6TPM
GTEx:22.5RPKM
FANTOM5:54.1Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 12.6
overview Male, age 54 Sample 1
TPM: 31.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 14.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 10.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 15.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 9.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 7.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 10.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 9.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 18.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 9.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 22.5
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 25.8
Samples: 149

Max RPKM: 50.5
Min RPKM: 8.8
Std RPKM: 9.0
Median RPKM: 24.6
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 50.5
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 49.1
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 48.3
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 46.9
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 46.2
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 45.6
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 44.8
GTEX-V955-1726-SM-4JBHF 60-69 years, male 44.8
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 43.2
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 42.1
Show all
Colon - Transverse
RPKM: 20.0
Samples: 196

Max RPKM: 51.2
Min RPKM: 4.1
Std RPKM: 6.9
Median RPKM: 19.4
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 51.2
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 45.4
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 44.8
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 44.8
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 36.1
GTEX-Q734-1126-SM-48TZY 40-49 years, female 35.0
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 34.9
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 34.5
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 32.8
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 32.5
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 54.1
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 38.8
FF:10014-101C5 62,83,84 years, mixed 54.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.