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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 159.9
Min RPKM: 2.0
Std RPKM: 19.6
Median RPKM: 8.5
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
159.9
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
59.4
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
50.4
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
49.0
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
48.8
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
47.6
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
44.5
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
33.6
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
32.5
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
29.6
GTEX-13111-1426-SM-5DUW3
50-59 years, male
24.7
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
22.4
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
22.0
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
21.8
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
20.7
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
20.6
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
19.0
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
18.1
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
17.8
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
16.8
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
16.6
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
16.3
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
15.3
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
15.2
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
15.1
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
14.9
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
14.1
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
14.0
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
13.8
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
12.1
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
11.9
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
11.9
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
11.7
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
11.6
GTEX-1192X-2526-SM-59868
50-59 years, male
11.4
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
11.3
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
10.7
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
10.6
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
10.6
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
10.4
GTEX-1122O-1326-SM-5H11F
60-69 years, female
10.1
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
9.2
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
8.8
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
8.6
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
8.5
GTEX-13113-1226-SM-5EGHT
60-69 years, female
8.4
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
7.8
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
7.8
GTEX-117YX-0326-SM-5GICL
50-59 years, male
7.7
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
7.7
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
7.7
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
7.6
GTEX-111YS-1426-SM-5GID8
60-69 years, male
7.2
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
7.2
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
7.2
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
7.1
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
6.8
GTEX-13O61-1326-SM-5KM31
60-69 years, male
6.5
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
6.1
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
6.0
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
5.9
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
5.9
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
5.9
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
5.7
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
5.7
GTEX-ZTSS-0926-SM-59865
40-49 years, male
5.5
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
5.4
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
5.3
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
5.2
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
5.2
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
5.1
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
5.1
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
4.9
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
4.9
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
4.7
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
4.3
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
4.2
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
4.2
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
4.2
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
4.0
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
3.6
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
3.5
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
3.4
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
3.3
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
2.5
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
2.4
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
2.2
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
2.0
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.