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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 4178.6
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1772.5
Min RPKM: 54.4
Std RPKM: 230.4
Median RPKM: 157.3
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
1772.5
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
898.1
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
800.0
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
748.5
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
682.4
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
642.5
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
638.1
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
632.8
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
615.5
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
562.5
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
561.0
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
560.6
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
508.1
GTEX-WL46-2926-SM-3LK82
50-59 years, male
491.0
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
485.8
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
477.5
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
461.2
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
447.1
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
430.2
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
427.6
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
408.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
372.8
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
367.9
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
353.5
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
339.8
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
337.3
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
325.2
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
313.2
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
294.6
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
282.8
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
274.9
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
269.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
268.1
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
266.9
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
253.2
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
236.1
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
234.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
228.3
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
219.3
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
202.2
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
193.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
193.5
GTEX-145MF-2726-SM-5O995
50-59 years, male
190.9
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
187.3
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
184.1
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
181.6
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
181.0
GTEX-144FL-3026-SM-5O99C
50-59 years, male
180.4
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
179.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
178.3
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
176.7
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
176.3
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
172.5
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
166.6
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
159.0
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
158.4
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
158.0
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
156.6
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
156.2
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
156.2
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
155.7
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
154.8
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
150.6
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
149.2
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
149.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
148.9
GTEX-11GSP-3226-SM-5986O
60-69 years, female
147.3
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
147.2
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
145.2
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
140.6
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
138.9
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
137.0
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
136.0
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
133.9
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
132.3
GTEX-1128S-2726-SM-5H12C
60-69 years, female
130.4
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
130.4
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
129.8
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
127.4
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
126.0
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
125.5
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
124.7
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
122.3
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
117.4
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
115.9
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
114.6
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
111.2
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
110.7
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
106.8
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
102.5
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
102.3
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
100.8
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
100.8
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
98.4
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
96.5
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
92.1
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
90.9
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
90.3
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
86.2
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
84.3
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
83.7
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
83.5
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
83.5
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
82.7
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
80.6
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
78.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
77.8
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
77.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
67.4
GTEX-11PRG-2926-SM-5987A
50-59 years, male
66.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
64.8
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
60.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
59.8
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
54.4
Show all
Brain - Frontal Cortex (BA9) RPKM: 248.7
Samples: 108
Max RPKM: 1959.5
Min RPKM: 52.3
Std RPKM: 283.3
Median RPKM: 161.2
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
1959.5
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
1643.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
1046.0
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
1040.4
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
769.6
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
735.3
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
617.3
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
617.2
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
599.7
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
516.9
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
465.5
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
464.8
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
442.4
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
440.4
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
428.7
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
409.4
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
390.2
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
363.6
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
362.2
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
346.2
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
333.3
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
331.7
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
302.3
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
285.7
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
285.2
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
283.2
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
278.3
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
271.6
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
265.3
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
252.9
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
241.1
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
239.1
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
229.7
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
218.2
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
217.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
217.1
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
214.5
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
209.8
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
204.3
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
203.0
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
198.4
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
193.5
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
191.4
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
187.3
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
184.4
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
180.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
179.0
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
175.7
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
169.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
168.7
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
167.0
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
166.2
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
165.8
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
163.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
158.6
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
158.1
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
153.9
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
152.6
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
150.2
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
145.1
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
143.9
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
143.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
142.1
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
140.3
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
136.4
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
126.3
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
124.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
122.3
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
121.6
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
120.8
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
117.6
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
116.8
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
114.3
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
113.0
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
111.4
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
108.7
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
107.5
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
106.6
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
105.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
105.0
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
104.9
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
101.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
101.2
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
99.4
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
98.9
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
96.9
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
96.8
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
95.7
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
92.1
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
89.5
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
86.2
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
85.3
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
85.0
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
84.8
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
82.5
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
76.3
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
74.8
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
74.1
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
73.6
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
73.1
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
71.7
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
71.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
66.8
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
64.9
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
62.9
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
58.4
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
58.1
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
52.3
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.