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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2127.3
Min RPKM: 89.4
Std RPKM: 309.4
Median RPKM: 362.2
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
2127.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
1591.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
1538.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
1341.3
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
1281.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
1060.9
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
1004.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
924.9
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
817.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
813.9
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
805.7
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
778.3
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
771.2
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
765.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
740.4
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
729.8
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
729.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
701.5
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
675.5
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
671.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
658.8
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
645.0
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
613.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
608.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
581.4
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
564.9
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
560.7
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
557.5
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
554.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
553.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
535.8
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
513.8
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
512.1
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
508.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
464.9
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
463.2
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
462.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
459.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
454.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
449.1
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
449.0
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
448.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
447.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
429.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
421.2
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
417.9
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
412.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
400.9
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
398.2
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
390.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
387.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
384.7
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
378.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
377.2
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
372.5
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
372.2
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
369.6
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
365.1
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
362.2
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
357.3
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
356.7
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
345.4
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
341.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
341.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
339.0
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
338.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
333.5
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
333.1
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
332.8
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
329.9
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
329.3
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
325.3
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
325.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
320.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
317.8
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
309.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
306.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
302.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
300.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
299.6
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
299.1
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
297.8
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
297.7
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
292.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
291.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
287.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
285.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
278.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
278.1
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
274.4
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
273.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
271.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
270.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
264.1
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
259.5
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
258.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
254.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
249.4
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
244.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
238.4
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
238.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
234.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
231.8
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
230.8
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
226.0
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
222.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
216.8
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
212.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
199.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
191.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
187.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
180.2
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
180.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
159.8
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
126.1
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
120.6
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
89.4
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.