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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 560.2
Min RPKM: 84.3
Std RPKM: 84.4
Median RPKM: 200.2
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
560.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
491.4
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
464.7
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
390.8
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
388.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
372.1
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
363.6
GTEX-PX3G-0926-SM-48U12
20-29 years, female
360.7
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
348.5
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
346.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
328.2
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
303.4
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
300.9
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
295.4
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
284.2
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
279.7
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
279.5
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
276.1
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
273.6
GTEX-QLQW-0126-SM-447BK
30-39 years, male
272.8
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
272.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
271.1
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
269.0
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
259.3
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
252.5
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
252.4
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
248.2
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
247.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
243.3
GTEX-Q734-0226-SM-48U1A
40-49 years, female
240.3
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
238.5
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
238.3
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
231.1
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
231.0
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
229.9
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
228.3
GTEX-13111-0126-SM-5EGHO
50-59 years, male
226.4
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
225.5
GTEX-QV31-0126-SM-447BP
30-39 years, male
224.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
223.5
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
222.3
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
221.0
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
219.5
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
218.7
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
218.2
GTEX-QCQG-0226-SM-48U28
50-59 years, female
216.3
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
214.7
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
206.9
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
206.3
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
204.4
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
203.8
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
201.7
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
198.8
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
197.7
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
194.3
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
192.6
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
189.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
186.9
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
183.7
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
181.6
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
178.9
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
178.2
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
177.7
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
173.8
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
171.6
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
170.8
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
170.4
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
170.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
170.0
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
169.2
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
167.3
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
163.6
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
163.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
162.8
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
160.2
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
155.5
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
154.4
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
154.3
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
151.3
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
150.9
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
150.3
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
148.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
146.0
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
144.8
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
144.6
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
140.5
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
139.6
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
139.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
137.4
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
135.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
134.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
129.9
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
129.8
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
128.4
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
127.8
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
127.4
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
125.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
122.7
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
114.3
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
110.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
109.5
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
104.9
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
104.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
84.3
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.