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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 890.6
Min RPKM: 76.0
Std RPKM: 196.7
Median RPKM: 273.2
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
890.6
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
767.4
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
754.1
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
711.9
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
684.0
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
668.7
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
662.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
654.6
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
649.9
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
633.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
626.9
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
617.0
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
582.9
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
569.3
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
563.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
549.8
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
543.5
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
541.3
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
524.5
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
522.3
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
515.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
514.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
512.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
509.2
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
503.6
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
489.7
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
452.6
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
450.1
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
419.5
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
411.5
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
402.5
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
401.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
384.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
376.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
365.4
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
362.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
360.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
344.5
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
344.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
332.6
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
327.3
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
312.9
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
307.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
297.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
288.7
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
286.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
274.2
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
272.2
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
269.1
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
267.3
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
265.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
263.7
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
260.0
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
252.7
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
251.1
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
243.4
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
241.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
240.8
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
239.3
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
233.4
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
220.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
213.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
208.5
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
198.8
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
192.5
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
191.1
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
189.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
177.4
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
176.3
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
164.1
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
163.2
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
157.6
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
157.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
156.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
143.3
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
138.8
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
135.2
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
133.5
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
133.4
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
132.9
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
130.3
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
128.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
127.8
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
124.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
112.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
102.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
100.3
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
95.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
94.9
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
90.8
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
90.2
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
88.2
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
77.0
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
76.0
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.