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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 1453.4
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 939.5
Min RPKM: 137.2
Std RPKM: 174.3
Median RPKM: 600.0
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
939.5
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
908.7
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
892.7
GTEX-WL46-2926-SM-3LK82
50-59 years, male
892.4
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
861.7
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
843.1
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
825.8
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
823.1
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
818.6
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
815.6
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
811.7
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
800.0
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
779.9
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
767.1
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
762.0
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
758.8
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
758.1
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
751.5
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
747.5
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
741.9
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
739.7
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
738.2
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
737.4
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
733.9
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
733.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
726.2
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
717.5
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
716.9
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
707.9
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
701.0
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
700.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
699.1
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
697.4
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
695.9
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
694.9
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
691.9
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
691.2
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
686.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
675.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
674.9
GTEX-145MF-2726-SM-5O995
50-59 years, male
674.4
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
667.8
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
667.0
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
662.5
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
660.0
GTEX-11PRG-2926-SM-5987A
50-59 years, male
659.1
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
656.1
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
655.8
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
650.1
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
637.4
GTEX-X585-3026-SM-46MWF
50-59 years, male
633.4
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
628.4
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
621.9
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
610.2
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
607.2
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
604.1
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
600.2
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
599.8
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
596.2
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
589.6
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
588.4
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
578.9
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
576.7
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
575.1
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
574.0
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
566.6
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
566.1
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
542.3
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
536.8
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
530.0
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
529.9
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
521.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
520.4
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
518.5
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
514.1
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
513.9
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
506.6
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
499.4
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
495.5
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
495.0
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
488.8
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
483.1
GTEX-1128S-2726-SM-5H12C
60-69 years, female
479.4
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
477.0
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
476.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
464.6
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
461.7
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
452.0
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
447.1
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
442.6
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
440.5
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
434.0
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
416.5
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
397.8
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
380.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
380.4
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
379.3
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
363.3
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
352.2
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
336.9
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
331.8
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
329.0
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
324.2
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
320.4
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
308.7
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
308.5
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
307.7
GTEX-144FL-3026-SM-5O99C
50-59 years, male
286.9
GTEX-11GSP-3226-SM-5986O
60-69 years, female
274.8
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
271.2
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
267.4
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
228.6
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
188.9
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
137.2
Show all
Brain - Frontal Cortex (BA9) RPKM: 669.2
Samples: 108
Max RPKM: 1260.7
Min RPKM: 144.1
Std RPKM: 247.5
Median RPKM: 702.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
1260.7
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
1152.0
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
1045.6
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
1029.6
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
1023.9
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
1022.7
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
1016.3
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
1008.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
981.9
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
965.2
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
961.8
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
961.8
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
951.6
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
947.8
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
928.6
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
921.7
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
914.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
913.7
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
913.0
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
908.5
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
905.9
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
904.5
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
897.7
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
893.7
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
889.5
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
886.2
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
880.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
871.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
866.1
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
863.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
848.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
840.2
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
839.5
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
830.7
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
825.5
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
816.0
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
812.6
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
811.7
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
808.2
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
804.3
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
791.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
786.7
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
781.5
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
776.0
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
770.9
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
763.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
761.8
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
749.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
736.5
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
733.4
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
717.8
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
717.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
716.2
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
705.0
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
699.4
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
695.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
686.7
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
683.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
682.1
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
674.4
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
666.3
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
651.5
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
631.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
628.3
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
621.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
602.4
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
599.2
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
585.2
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
582.9
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
582.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
564.6
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
555.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
536.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
533.8
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
526.1
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
489.8
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
486.6
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
477.8
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
470.4
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
468.7
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
468.7
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
461.8
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
449.3
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
436.7
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
428.7
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
427.8
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
427.5
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
411.2
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
399.1
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
391.0
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
375.3
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
373.3
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
372.7
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
326.9
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
325.7
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
308.1
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
308.0
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
305.7
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
303.0
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
298.3
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
293.8
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
288.7
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
244.2
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
239.8
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
231.1
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
228.9
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
191.5
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
144.1
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.