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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 570.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 394.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 702.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 635.1
Min RPKM: 58.7
Std RPKM: 76.0
Median RPKM: 153.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
635.1
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
402.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
391.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
389.3
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
382.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
367.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
353.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
352.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
341.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
335.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
314.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
313.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
311.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
302.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
301.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
299.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
297.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
288.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
284.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
281.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
277.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
272.2
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
270.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
269.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
267.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
258.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
257.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
252.5
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
248.9
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
246.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
243.6
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
238.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
235.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
235.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
227.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
226.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
226.2
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
224.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
222.3
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
219.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
219.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
218.9
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
212.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
211.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
211.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
208.1
GTEX-X261-0626-SM-3NMD9
50-59 years, male
207.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
207.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
206.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
205.8
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
205.0
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
202.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
200.5
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
200.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
199.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
198.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
195.5
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
195.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
192.4
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
191.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
188.0
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
185.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
185.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
183.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
182.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
181.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
180.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
179.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
178.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
178.2
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
177.2
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
176.6
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
175.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
172.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
172.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
171.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
171.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
171.0
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
170.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
170.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
169.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
168.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
168.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
167.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
167.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
167.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
165.9
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
165.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
164.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
163.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
163.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
163.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
161.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
160.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
160.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
160.5
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
159.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
159.2
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
158.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
158.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
158.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
157.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
156.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
155.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
155.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
154.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
153.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
153.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
152.0
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
151.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
151.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
151.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
150.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
149.4
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
149.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
148.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
147.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
147.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
147.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
147.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
147.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
146.4
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
145.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
145.7
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
145.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
145.6
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
145.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
143.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
142.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
139.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
139.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
137.3
GTEX-S341-1526-SM-4AD6K
40-49 years, female
137.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
136.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
136.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
134.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
134.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
134.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
133.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
131.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
130.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
130.1
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
129.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
128.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
127.0
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
126.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
126.3
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
125.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
125.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
125.1
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
124.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
124.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
123.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
121.5
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
120.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
119.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
119.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
118.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
118.8
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
118.5
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
118.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
118.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
118.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
117.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
116.0
GTEX-11OF3-1926-SM-59889
60-69 years, male
115.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
114.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
112.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
112.6
GTEX-11EI6-0626-SM-5985T
60-69 years, male
111.9
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
111.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
111.7
GTEX-RU72-0626-SM-46MUI
50-59 years, female
111.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
110.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
110.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
110.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
109.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
109.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
108.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
108.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
106.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
105.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
104.9
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
104.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
104.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
103.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
103.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
101.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
101.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
101.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
101.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
100.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
100.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
99.9
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
98.5
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
97.0
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
96.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
95.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
94.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
94.4
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
93.9
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
93.6
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
91.8
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
89.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
85.5
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
85.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
85.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
83.0
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
79.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
78.1
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
71.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
67.9
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
62.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
58.7
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.