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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 245.1
Min RPKM: 11.4
Std RPKM: 60.2
Median RPKM: 115.0
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
245.1
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
237.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
227.2
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
204.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
198.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
198.3
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
197.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
196.6
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
193.1
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
191.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
190.5
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
190.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
188.2
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
185.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
184.5
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
182.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
182.3
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
181.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
181.0
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
180.3
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
174.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
173.8
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
173.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
172.6
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
171.5
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
170.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
165.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
165.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
164.2
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
163.2
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
162.7
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
161.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
158.8
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
157.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
155.8
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
153.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
153.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
149.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
147.1
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
146.8
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
145.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
145.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
145.3
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
143.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
139.5
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
138.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
137.5
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
137.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
132.7
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
132.3
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
130.3
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
129.9
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
129.7
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
128.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
126.3
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
122.9
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
118.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
117.0
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
115.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
113.8
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
110.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
109.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
108.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
103.8
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
102.9
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
102.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
97.4
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
97.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
93.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
92.8
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
90.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
87.6
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
87.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
84.3
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
83.2
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
82.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
80.3
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
79.9
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
78.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
72.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
70.9
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
66.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
65.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
62.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
61.9
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
61.1
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
59.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
57.4
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
54.2
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
52.7
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
50.0
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
49.5
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
47.2
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
46.6
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
44.0
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
43.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
42.8
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
40.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
40.1
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
39.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
37.6
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
36.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
32.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
30.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
29.4
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
29.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
28.3
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
27.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
26.0
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
24.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
23.7
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
22.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
19.7
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
17.2
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
12.4
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
11.8
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
11.4
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.