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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 118.2
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 39.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 9.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 704.9
Min RPKM: 5.1
Std RPKM: 91.8
Median RPKM: 49.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
704.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
686.5
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
365.4
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
356.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
321.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
318.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
302.6
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
278.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
255.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
250.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
229.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
220.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
216.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
208.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
207.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
205.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
205.3
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
198.4
GTEX-11EI6-0626-SM-5985T
60-69 years, male
184.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
181.3
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
178.0
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
175.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
175.4
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
170.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
168.2
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
168.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
165.1
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
162.4
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
152.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
149.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
146.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
145.5
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
144.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
144.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
141.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
139.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
138.6
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
132.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
132.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
132.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
131.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
128.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
127.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
126.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
123.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
122.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
117.5
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
113.6
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
113.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
113.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
113.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
112.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
112.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
111.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
109.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
108.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
101.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
99.4
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
96.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
96.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
95.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
93.7
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
92.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
92.3
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
90.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
89.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
87.5
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
87.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
85.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
85.2
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
85.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
83.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
83.5
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
74.2
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
73.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
72.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
72.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
72.2
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
72.1
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
71.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
71.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
69.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
68.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
67.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
67.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
63.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
63.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
62.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
62.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
61.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
60.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
59.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
58.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
58.6
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
58.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
58.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
57.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
57.8
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
56.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
55.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
55.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
55.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
55.0
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
54.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
52.2
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
50.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
49.3
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
48.8
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
48.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
48.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
48.5
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
47.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
47.0
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
47.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
47.0
GTEX-13113-1726-SM-5GCOO
60-69 years, female
46.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
46.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
46.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
46.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
45.3
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
44.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
44.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
44.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
43.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
43.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
43.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
42.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
41.2
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
40.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
40.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
39.9
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
39.9
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
38.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
38.5
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
37.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
36.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
36.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
35.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
35.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
35.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
35.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
35.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
35.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
34.1
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
34.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
33.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
33.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
33.2
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
32.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
32.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
31.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
30.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
30.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
30.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
29.9
GTEX-QEL4-2126-SM-447AE
50-59 years, male
29.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
29.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
27.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
26.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
25.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
24.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
24.8
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
24.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
24.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
24.5
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
24.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
24.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
23.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
23.8
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
23.0
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
22.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
22.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
22.1
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
20.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
19.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
19.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
19.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
19.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
19.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
18.6
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
18.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
17.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
17.5
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
17.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
17.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
17.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
16.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
16.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
16.5
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
16.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
16.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
16.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
15.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
15.8
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
15.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
15.1
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
12.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
11.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
10.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
10.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
10.7
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
10.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
10.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
9.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
9.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
8.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
7.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
7.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
7.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
7.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
6.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
5.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
5.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
5.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.