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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 173.3
Min RPKM: 57.6
Std RPKM: 17.6
Median RPKM: 88.0
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
173.3
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
151.1
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
125.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
123.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
121.7
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
116.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
116.6
GTEX-QLQW-0126-SM-447BK
30-39 years, male
115.8
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
113.6
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
110.3
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
109.9
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
109.8
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
108.0
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
107.6
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
107.5
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
106.7
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
106.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
104.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
103.5
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
103.1
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
102.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
102.4
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
102.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
101.5
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
101.1
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
100.9
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
100.5
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
100.2
GTEX-144GN-2126-SM-5O99D
50-59 years, male
98.9
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
97.9
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
97.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
97.0
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
97.0
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
96.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
95.8
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
94.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
93.7
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
92.4
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
92.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
91.8
GTEX-QV31-0126-SM-447BP
30-39 years, male
91.7
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
91.5
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
91.0
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
90.7
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
90.4
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
90.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
89.6
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
89.5
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
88.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
88.8
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
88.5
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
88.0
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
87.9
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
87.5
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
86.8
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
86.6
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
86.6
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
86.2
GTEX-PX3G-0926-SM-48U12
20-29 years, female
86.0
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
86.0
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
85.9
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
85.2
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
85.0
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
84.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
84.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
84.2
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
83.8
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
83.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
82.9
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
81.5
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
80.9
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
80.9
GTEX-QCQG-0226-SM-48U28
50-59 years, female
80.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
80.7
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
80.4
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
80.4
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
80.1
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
80.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
79.9
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
79.8
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
79.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
77.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
77.8
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
77.8
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
77.4
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
76.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
76.4
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
75.5
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
75.4
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
74.5
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
74.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
72.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
71.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
71.1
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
69.9
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
69.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
67.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
66.3
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
65.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
65.0
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
64.8
GTEX-X585-1826-SM-4QAS3
50-59 years, male
62.7
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
59.2
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
57.6
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.