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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 624.8
Min RPKM: 141.0
Std RPKM: 115.7
Median RPKM: 257.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
624.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
603.5
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
601.4
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
599.1
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
569.6
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
542.1
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
522.7
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
515.6
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
512.0
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
497.1
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
474.7
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
454.5
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
443.1
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
436.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
410.1
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
409.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
405.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
405.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
392.0
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
388.6
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
383.9
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
377.7
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
377.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
371.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
370.1
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
369.3
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
367.1
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
363.5
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
360.7
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
357.4
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
352.0
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
346.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
340.8
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
340.4
GTEX-144GN-2126-SM-5O99D
50-59 years, male
334.4
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
331.5
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
317.0
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
316.7
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
311.1
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
306.0
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
296.5
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
295.3
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
293.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
291.7
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
289.7
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
289.1
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
283.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
276.1
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
274.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
268.9
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
266.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
257.8
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
256.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
254.0
GTEX-Q734-0226-SM-48U1A
40-49 years, female
252.3
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
251.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
246.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
245.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
245.9
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
243.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
242.5
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
241.7
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
240.4
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
238.6
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
237.6
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
236.6
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
232.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
232.6
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
232.5
GTEX-R55G-0226-SM-48FEI
40-49 years, female
231.6
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
229.3
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
227.2
GTEX-QLQW-0126-SM-447BK
30-39 years, male
226.9
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
226.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
225.6
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
221.9
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
219.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
217.9
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
211.9
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
210.4
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
206.0
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
204.7
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
203.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
202.2
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
197.3
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
191.7
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
188.8
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
187.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
186.0
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
185.2
GTEX-QV31-0126-SM-447BP
30-39 years, male
177.3
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
177.3
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
176.9
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
174.3
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
173.2
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
173.0
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
172.7
GTEX-X585-1826-SM-4QAS3
50-59 years, male
172.3
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
165.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
165.5
GTEX-PX3G-0926-SM-48U12
20-29 years, female
162.7
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
158.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
143.9
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
141.0
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.