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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 347.7
Min RPKM: 193.9
Std RPKM: 27.2
Median RPKM: 263.6
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
347.7
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
308.3
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
306.7
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
305.2
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
302.6
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
301.4
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
300.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
299.4
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
298.5
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
298.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
297.4
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
297.3
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
293.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
291.4
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
290.8
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
289.9
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
286.3
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
286.0
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
285.8
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
284.0
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
283.9
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
283.8
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
283.5
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
282.9
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
282.5
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
281.4
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
280.1
GTEX-R55G-0226-SM-48FEI
40-49 years, female
280.1
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
279.8
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
279.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
279.3
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
278.6
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
278.1
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
275.6
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
274.9
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
274.6
GTEX-X585-1826-SM-4QAS3
50-59 years, male
271.7
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
269.5
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
269.4
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
268.8
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
268.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
267.8
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
267.5
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
266.1
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
266.0
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
265.7
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
265.3
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
265.2
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
264.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
264.7
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
264.3
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
263.7
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
263.4
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
263.3
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
263.2
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
262.5
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
262.1
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
262.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
261.9
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
261.0
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
260.9
GTEX-QCQG-0226-SM-48U28
50-59 years, female
260.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
257.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
256.9
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
255.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
251.7
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
251.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
250.5
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
250.3
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
247.1
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
246.3
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
246.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
244.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
243.9
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
243.4
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
243.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
241.7
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
240.9
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
240.8
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
239.7
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
238.7
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
238.7
GTEX-QV31-0126-SM-447BP
30-39 years, male
238.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
237.2
GTEX-Q734-0226-SM-48U1A
40-49 years, female
235.3
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
232.7
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
232.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
230.2
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
230.2
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
230.0
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
229.7
GTEX-QLQW-0126-SM-447BK
30-39 years, male
228.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
226.7
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
221.9
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
221.2
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
220.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
219.8
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
218.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
215.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
214.7
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
213.2
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
211.2
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
208.6
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
193.9
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.