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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2542.3
Min RPKM: 825.6
Std RPKM: 365.9
Median RPKM: 1441.6
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
2542.3
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
2343.8
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
2261.2
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
2261.1
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
2258.6
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
2245.0
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
2109.0
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
2090.7
GTEX-RU72-2226-SM-46MUE
50-59 years, female
2090.6
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
2084.0
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
2071.9
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
2037.3
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
2027.1
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1975.8
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1937.5
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1918.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1898.7
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1876.9
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1862.7
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1862.7
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1838.6
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
1816.0
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
1790.9
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
1759.6
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
1755.5
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
1743.7
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
1738.9
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
1708.2
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
1697.8
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
1682.5
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
1668.5
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
1653.7
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
1624.3
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
1573.1
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
1570.5
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
1561.7
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
1554.8
GTEX-P78B-1926-SM-3P616
40-49 years, female
1553.7
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
1547.9
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
1546.2
GTEX-11I78-1926-SM-59878
50-59 years, female
1544.4
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1537.3
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
1518.7
GTEX-S32W-1226-SM-4AD67
50-59 years, female
1516.8
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
1510.1
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
1462.7
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
1461.6
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
1450.8
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
1441.6
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
1427.0
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
1424.4
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
1409.0
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
1407.8
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
1407.2
GTEX-S341-0726-SM-4AD5R
40-49 years, female
1401.0
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
1394.3
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
1385.0
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
1379.8
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
1363.1
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
1361.2
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
1354.0
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
1335.8
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
1335.0
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
1330.5
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
1304.5
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
1301.4
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
1299.7
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
1296.4
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
1288.0
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
1280.4
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1272.0
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
1253.6
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
1243.3
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
1229.1
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
1211.5
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
1206.4
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
1205.3
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
1198.1
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
1192.8
GTEX-QCQG-1426-SM-48U22
50-59 years, female
1182.0
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
1179.6
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
1152.6
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
1147.8
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
1140.4
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
1125.1
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
1119.3
GTEX-Q734-0726-SM-48TZP
40-49 years, female
1113.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
1107.1
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
1103.1
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
1091.3
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
1051.6
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
1028.4
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
1027.9
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
1016.3
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
989.6
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
834.2
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
825.6
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.