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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 286.2
Min RPKM: 64.1
Std RPKM: 44.3
Median RPKM: 161.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
286.2
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
277.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
265.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
252.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
250.4
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
248.6
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
245.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
238.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
238.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
236.1
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
235.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
234.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
219.4
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
215.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
212.6
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
211.3
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
210.7
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
209.7
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
209.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
206.7
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
206.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
204.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
202.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
198.9
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
198.9
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
197.0
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
196.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
195.6
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
194.3
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
194.1
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
192.4
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
191.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
184.4
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
181.4
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
179.9
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
178.9
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
178.1
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
177.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
176.5
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
176.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
176.1
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
174.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
174.6
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
174.6
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
174.0
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
171.6
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
169.0
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
168.9
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
167.6
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
167.0
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
166.9
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
166.4
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
164.2
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
163.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
163.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
163.0
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
162.3
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
161.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
161.0
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
157.1
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
156.7
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
156.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
156.4
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
154.7
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
154.6
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
151.8
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
151.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
151.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
150.0
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
149.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
149.9
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
149.4
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
147.4
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
147.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
147.1
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
146.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
145.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
145.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
144.6
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
144.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
142.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
142.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
141.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
138.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
137.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
136.6
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
136.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
135.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
134.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
134.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
133.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
131.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
130.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
130.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
125.4
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
125.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
123.0
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
122.4
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
121.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
120.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
120.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
117.3
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
116.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
115.8
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
114.5
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
113.9
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
107.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
104.9
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
97.5
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
95.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
95.2
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
94.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
93.2
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
83.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
83.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
66.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
64.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.