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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1598.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1607.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2848
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1390.8
Min RPKM: 356.8
Std RPKM: 177.0
Median RPKM: 620.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1390.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1305.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1139.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
1092.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1078.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
1055.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1038.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
994.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
990.0
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
987.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
982.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
944.4
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
944.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
924.4
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
922.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
918.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
913.4
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
911.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
899.0
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
893.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
888.3
GTEX-1192X-2326-SM-5987X
50-59 years, male
883.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
870.4
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
867.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
866.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
866.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
862.5
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
854.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
847.4
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
838.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
837.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
832.3
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
828.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
827.9
GTEX-QEL4-2126-SM-447AE
50-59 years, male
815.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
810.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
810.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
808.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
807.5
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
801.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
800.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
798.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
796.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
791.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
790.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
776.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
767.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
751.8
GTEX-13113-1726-SM-5GCOO
60-69 years, female
750.1
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
747.7
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
742.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
740.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
736.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
731.7
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
731.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
721.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
720.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
718.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
716.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
712.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
711.0
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
709.0
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
707.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
707.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
702.6
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
702.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
700.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
699.5
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
697.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
695.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
695.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
693.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
686.7
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
686.4
GTEX-XBED-1626-SM-47JYN
60-69 years, male
683.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
682.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
681.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
680.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
679.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
679.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
676.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
675.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
674.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
673.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
671.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
670.3
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
669.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
668.0
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
667.5
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
656.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
655.8
GTEX-111YS-1926-SM-5GICC
60-69 years, male
655.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
653.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
653.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
650.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
649.0
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
647.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
637.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
631.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
630.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
628.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
627.1
GTEX-TML8-1226-SM-32QON
40-49 years, female
625.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
623.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
622.1
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
621.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
620.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
620.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
616.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
615.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
610.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
607.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
606.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
605.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
604.9
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
603.9
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
601.2
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
598.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
596.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
594.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
592.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
589.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
588.5
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
585.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
584.6
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
580.8
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
579.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
579.0
GTEX-11OF3-1926-SM-59889
60-69 years, male
578.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
569.6
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
567.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
565.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
565.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
563.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
562.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
561.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
558.6
GTEX-1122O-1226-SM-5H113
60-69 years, female
557.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
557.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
552.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
551.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
549.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
547.2
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
541.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
539.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
539.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
538.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
534.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
533.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
533.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
532.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
532.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
531.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
531.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
530.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
530.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
529.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
528.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
522.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
522.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
521.9
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
515.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
513.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
511.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
510.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
509.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
502.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
501.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
498.4
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
494.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
493.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
485.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
484.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
483.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
483.8
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
481.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
479.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
474.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
470.6
GTEX-144GM-0926-SM-5O994
20-29 years, male
467.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
464.5
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
463.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
463.7
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
461.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
460.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
458.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
455.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
455.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
455.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
452.0
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
450.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
444.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
441.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
435.4
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
434.5
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
433.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
427.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
426.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
421.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
420.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
419.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
415.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
411.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
411.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
410.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
402.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
396.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
394.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
392.9
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
384.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
383.9
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
368.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
362.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
356.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.