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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 9411.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 6495.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 2928.4
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 15393.2
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 12005.5
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 10478.7
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 3709.2
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 6146.8
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 6384.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 22693.4
Min RPKM: 829.1
Std RPKM: 4057.1
Median RPKM: 9446.8
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
22693.4
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
22096.7
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
20288.1
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
19722.2
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
19716.9
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
19327.0
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
18137.2
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
17495.9
GTEX-11OF3-1826-SM-5987N
60-69 years, male
17158.5
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
16691.8
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
16587.0
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
16499.7
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
16089.6
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
15917.0
GTEX-S95S-1126-SM-4B64E
60-69 years, male
15738.1
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
15447.1
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
15148.6
GTEX-13112-0226-SM-5P9IV
50-59 years, male
15051.0
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
14597.8
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
14581.7
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
14535.2
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
14261.4
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
14093.1
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
13779.5
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
13717.2
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
13652.5
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
13615.9
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
13505.2
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
13488.0
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
13470.7
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
13397.3
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
13183.6
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
13167.1
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
12993.5
GTEX-13111-1526-SM-5EGJX
50-59 years, male
12989.4
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
12869.0
GTEX-V955-1926-SM-4KL1L
60-69 years, male
12796.4
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
12764.1
GTEX-REY6-0126-SM-48FDT
60-69 years, male
12757.4
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
12682.2
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
12611.5
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
12322.7
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
12212.9
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
12101.7
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
12081.6
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
12041.9
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
11975.2
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
11868.6
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
11847.1
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
11845.6
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
11818.0
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
11759.7
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
11664.3
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
11632.4
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
11536.8
GTEX-Y111-2426-SM-4TT23
50-59 years, male
11518.1
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
11492.2
GTEX-11DXZ-2126-SM-59881
50-59 years, male
11368.2
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
11349.8
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
11298.5
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
11219.5
GTEX-R55D-0126-SM-48FEL
50-59 years, male
11165.3
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
11091.7
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
10927.3
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
10900.7
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
10881.0
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
10870.3
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
10844.3
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
10737.9
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
10659.7
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
10573.9
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
10516.5
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
10340.7
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
10312.7
GTEX-117XS-2026-SM-5GID1
60-69 years, male
10281.9
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
10098.0
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
10024.2
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
9899.1
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
9791.8
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
9756.6
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
9700.3
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
9645.7
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
9554.9
GTEX-12696-0226-SM-5EGL3
60-69 years, male
9545.6
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
9523.4
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
9483.1
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
9410.5
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
9398.5
GTEX-XPT6-1626-SM-4B655
20-29 years, male
9346.0
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
9336.1
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
9330.3
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
9288.3
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
9247.5
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
9225.2
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
9184.4
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
9118.2
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
9101.2
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
9055.4
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
8959.8
GTEX-R55C-1426-SM-48FED
40-49 years, male
8874.0
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
8838.7
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
8755.8
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
8584.0
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
8560.5
GTEX-QLQW-1026-SM-447A9
30-39 years, male
8496.9
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
8411.3
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
8395.8
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
8376.2
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
8346.5
GTEX-X261-2326-SM-4PQYU
50-59 years, male
8326.0
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
8321.2
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
8257.8
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
8194.8
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
8141.9
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
8101.7
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
7980.0
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
7838.6
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
7706.7
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
7700.8
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
7589.3
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
7552.5
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
7505.6
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
7351.6
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
7277.1
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
7269.6
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
7207.0
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
7150.2
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
7121.9
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
7035.9
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
6942.8
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
6934.4
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
6924.6
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
6900.3
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
6828.7
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
6649.7
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
6634.8
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
6475.0
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
6458.3
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
6243.3
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
6142.0
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
6110.0
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
6016.5
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
6000.8
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
5898.9
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
5878.3
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
5669.6
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
5633.6
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
5625.6
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
5390.0
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
5326.4
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
5260.6
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
4941.6
GTEX-RN64-2326-SM-48FDW
50-59 years, male
4834.4
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
4544.3
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
4538.0
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
4513.7
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
4443.8
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
4436.1
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
4396.7
GTEX-S33H-0126-SM-4AD62
30-39 years, male
4356.3
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
4262.6
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
4251.6
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
4032.3
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
3938.4
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
3883.1
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
3865.4
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
3577.8
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
2977.1
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
2791.4
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
2488.0
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
1811.7
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
829.1
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.