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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 947.1
Min RPKM: 33.9
Std RPKM: 235.1
Median RPKM: 445.9
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
947.1
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
905.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
880.5
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
798.1
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
789.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
782.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
780.7
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
778.3
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
772.2
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
764.3
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
742.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
732.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
727.9
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
727.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
711.4
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
684.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
682.9
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
676.5
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
670.4
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
665.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
657.7
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
652.9
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
650.6
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
645.7
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
645.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
641.0
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
631.5
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
628.2
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
627.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
625.9
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
615.2
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
614.4
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
613.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
588.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
581.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
574.5
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
573.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
559.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
550.6
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
548.8
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
543.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
542.7
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
537.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
530.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
523.8
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
517.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
517.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
515.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
513.1
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
512.6
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
504.4
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
502.3
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
500.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
498.4
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
495.6
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
467.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
467.3
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
455.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
445.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
435.4
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
429.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
422.5
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
415.7
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
409.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
399.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
394.2
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
389.5
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
389.3
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
389.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
382.4
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
375.2
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
372.4
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
359.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
327.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
312.1
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
309.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
289.6
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
287.4
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
277.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
270.2
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
267.2
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
266.4
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
245.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
244.0
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
241.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
229.5
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
224.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
213.9
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
212.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
208.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
208.1
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
177.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
166.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
166.3
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
160.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
149.8
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
146.4
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
144.5
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
141.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
124.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
123.8
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
117.3
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
117.1
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
114.2
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
104.7
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
104.3
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
97.7
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
79.1
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
74.6
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
73.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
73.4
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
72.4
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
61.2
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
50.4
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
44.2
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
35.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
33.9
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.