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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 80.0
Min RPKM: 5.5
Std RPKM: 17.2
Median RPKM: 40.2
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
80.0
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
76.6
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
73.1
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
68.8
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
65.1
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
63.1
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
60.8
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
59.7
GTEX-11I78-2026-SM-5987C
50-59 years, female
59.5
GTEX-S341-1226-SM-4AD5S
40-49 years, female
58.4
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
57.0
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
56.3
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
55.4
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
55.0
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
53.7
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
52.5
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
51.7
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
51.1
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
50.8
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
50.3
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
50.0
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
49.7
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
49.7
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
49.4
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
48.4
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
48.1
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
47.4
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
47.0
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
46.1
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
45.9
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
45.8
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
45.8
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
45.2
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
44.2
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
44.1
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
44.0
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
43.6
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
42.9
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
42.7
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
42.6
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
42.6
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
41.9
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
41.9
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
41.1
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
41.0
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
41.0
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
40.5
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
40.4
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
39.9
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
39.7
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
39.4
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
39.2
GTEX-QCQG-1226-SM-48U23
50-59 years, female
39.1
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
37.9
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
36.5
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
35.1
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
34.9
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
34.7
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
34.3
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
32.4
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
30.8
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
29.5
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
27.6
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
27.6
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
27.5
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
24.4
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
24.1
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
23.3
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
22.4
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
22.1
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
21.6
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
21.6
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
21.5
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
21.1
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
20.8
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
19.8
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
19.4
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
19.3
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
19.0
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
18.2
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
17.8
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
17.2
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
16.2
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
15.8
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
14.3
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
14.2
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
13.2
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
12.3
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
10.6
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
10.3
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
9.8
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
9.6
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
7.8
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
7.3
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
5.9
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
5.5
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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