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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 357.0
Min RPKM: 0.0
Std RPKM: 78.8
Median RPKM: 96.6
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
357.0
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
230.9
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
226.5
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
222.8
GTEX-S341-1226-SM-4AD5S
40-49 years, female
219.6
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
207.4
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
203.3
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
194.7
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
192.5
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
190.1
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
189.8
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
188.7
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
178.4
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
178.2
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
177.9
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
173.0
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
166.5
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
160.0
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
153.0
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
151.8
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
149.4
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
148.7
GTEX-11I78-2026-SM-5987C
50-59 years, female
144.7
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
144.7
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
143.6
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
141.0
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
140.9
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
138.6
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
137.3
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
134.8
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
130.5
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
127.7
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
127.0
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
125.2
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
125.0
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
122.2
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
121.0
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
118.3
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
113.2
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
112.6
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
111.8
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
110.1
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
106.1
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
105.7
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
105.6
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
101.3
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
101.2
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
98.4
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
94.7
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
94.6
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
94.3
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
89.5
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
77.7
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
76.5
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
71.1
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
60.3
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
42.9
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
33.6
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
31.8
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
22.6
GTEX-QCQG-1226-SM-48U23
50-59 years, female
22.0
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
21.3
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
17.7
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
16.6
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
11.6
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
10.1
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
9.8
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
3.7
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
3.7
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
2.5
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
1.0
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
0.9
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
0.8
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
0.7
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
0.6
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
0.5
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
0.3
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
0.3
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
0.3
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
0.3
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
0.2
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
0.1
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
0.1
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
0.1
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
0.1
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
0.1
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
0.1
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
0.1
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
0.1
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
0.0
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
0.0
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
0.0
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
0.0
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
0.0
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
0.0
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
0.0
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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