We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 5459.4
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 4929.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 8904.3
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 4895.4
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 3979.3
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 3674.3
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 2921.5
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 5319.3
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 4014.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1091.9
Min RPKM: 135.4
Std RPKM: 154.8
Median RPKM: 471.2
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
1091.9
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
892.1
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
877.0
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
857.4
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
849.2
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
836.7
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
793.4
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
779.5
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
779.3
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
779.1
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
774.6
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
755.2
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
721.8
GTEX-S33H-0126-SM-4AD62
30-39 years, male
703.4
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
698.1
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
697.9
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
696.0
GTEX-XPT6-1626-SM-4B655
20-29 years, male
693.1
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
684.6
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
677.0
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
669.7
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
667.8
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
666.1
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
662.3
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
657.8
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
647.5
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
646.8
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
641.4
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
638.6
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
631.3
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
630.1
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
626.8
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
615.7
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
611.4
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
609.6
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
608.7
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
605.9
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
603.9
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
598.0
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
594.0
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
593.2
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
591.6
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
584.3
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
570.9
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
570.7
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
569.7
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
568.8
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
566.6
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
562.5
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
559.5
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
555.9
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
547.8
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
545.3
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
544.6
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
544.1
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
543.8
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
540.5
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
538.7
GTEX-X261-2326-SM-4PQYU
50-59 years, male
533.6
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
533.0
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
531.7
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
531.1
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
530.5
GTEX-R55D-0126-SM-48FEL
50-59 years, male
526.2
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
521.7
GTEX-QLQW-1026-SM-447A9
30-39 years, male
520.9
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
519.0
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
517.5
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
517.4
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
514.9
GTEX-RN64-2326-SM-48FDW
50-59 years, male
513.3
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
506.1
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
504.1
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
498.3
GTEX-12696-0226-SM-5EGL3
60-69 years, male
496.4
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
491.5
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
491.2
GTEX-R55C-1426-SM-48FED
40-49 years, male
491.0
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
485.6
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
483.1
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
480.6
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
479.9
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
479.5
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
475.7
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
475.5
GTEX-11DXZ-2126-SM-59881
50-59 years, male
471.7
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
470.7
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
466.2
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
466.1
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
465.7
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
461.6
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
460.7
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
460.1
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
459.5
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
459.1
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
454.5
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
454.4
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
452.3
GTEX-13111-1526-SM-5EGJX
50-59 years, male
450.4
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
450.2
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
450.0
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
449.7
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
447.7
GTEX-11OF3-1826-SM-5987N
60-69 years, male
445.3
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
444.0
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
443.1
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
439.3
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
437.6
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
437.2
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
434.5
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
434.0
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
433.9
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
432.0
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
428.9
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
424.5
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
422.8
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
419.1
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
418.1
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
413.6
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
413.0
GTEX-V955-1926-SM-4KL1L
60-69 years, male
412.9
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
408.8
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
402.9
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
402.0
GTEX-117XS-2026-SM-5GID1
60-69 years, male
398.6
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
396.5
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
392.9
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
389.7
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
388.6
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
387.6
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
385.1
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
382.8
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
379.7
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
376.8
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
371.4
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
371.1
GTEX-S95S-1126-SM-4B64E
60-69 years, male
369.1
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
366.4
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
364.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
363.5
GTEX-REY6-0126-SM-48FDT
60-69 years, male
360.2
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
347.1
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
346.7
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
342.4
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
342.1
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
340.4
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
338.9
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
334.1
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
327.4
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
324.5
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
317.6
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
317.2
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
308.6
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
306.0
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
303.2
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
302.0
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
293.9
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
288.5
GTEX-Y111-2426-SM-4TT23
50-59 years, male
287.5
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
286.5
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
275.8
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
265.7
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
260.9
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
256.7
GTEX-13112-0226-SM-5P9IV
50-59 years, male
243.7
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
241.5
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
240.0
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
232.3
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
214.1
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
206.2
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
200.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
135.4
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.