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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1548.2
Min RPKM: 67.9
Std RPKM: 263.1
Median RPKM: 376.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
1548.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
1348.3
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
1332.6
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
1224.5
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
839.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
834.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
791.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
764.9
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
737.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
723.0
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
719.8
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
705.9
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
683.0
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
610.9
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
598.4
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
584.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
567.8
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
554.4
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
538.4
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
532.8
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
530.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
523.3
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
512.9
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
499.4
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
495.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
492.1
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
486.3
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
484.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
461.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
458.3
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
453.2
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
451.6
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
448.6
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
447.6
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
440.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
434.1
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
427.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
421.8
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
418.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
417.7
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
409.0
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
405.6
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
395.3
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
382.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
381.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
380.2
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
379.4
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
374.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
370.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
365.3
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
362.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
358.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
357.0
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
343.1
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
334.8
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
329.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
322.7
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
321.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
320.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
317.8
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
317.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
312.0
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
311.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
296.7
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
296.4
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
293.3
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
284.7
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
284.2
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
273.4
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
272.8
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
269.4
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
269.1
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
265.8
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
258.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
257.6
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
253.4
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
252.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
248.9
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
242.3
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
241.1
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
210.0
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
190.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
183.1
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
176.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
173.9
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
171.7
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
170.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
156.6
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
140.1
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
103.2
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
86.1
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
83.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
69.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
67.9
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.