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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1738.4
Min RPKM: 95.3
Std RPKM: 305.0
Median RPKM: 602.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
1738.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
1638.2
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
1546.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
1470.8
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
1429.0
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
1399.5
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
1274.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
1189.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
1123.9
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
1112.0
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
1087.8
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
1079.0
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
1054.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
1048.1
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
979.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
967.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
927.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
913.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
909.8
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
904.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
897.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
841.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
827.3
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
818.0
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
817.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
816.2
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
804.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
797.9
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
776.6
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
775.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
761.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
761.4
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
755.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
740.7
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
739.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
732.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
730.8
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
723.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
721.5
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
715.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
713.5
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
707.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
706.5
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
702.9
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
671.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
670.2
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
660.0
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
652.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
648.9
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
645.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
644.4
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
634.7
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
632.7
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
629.2
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
628.1
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
616.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
615.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
611.3
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
602.0
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
596.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
583.0
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
582.5
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
581.6
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
581.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
577.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
570.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
563.7
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
549.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
548.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
547.2
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
543.0
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
531.6
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
528.6
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
521.9
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
513.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
504.3
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
497.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
497.4
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
494.6
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
491.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
490.6
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
476.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
474.2
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
469.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
468.5
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
446.7
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
443.4
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
440.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
439.2
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
430.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
430.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
425.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
421.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
416.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
414.1
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
399.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
393.5
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
390.8
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
384.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
376.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
367.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
366.9
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
358.5
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
358.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
351.7
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
347.6
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
333.6
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
329.4
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
329.3
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
322.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
298.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
294.0
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
279.0
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
256.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
247.9
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
191.0
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
95.3
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.