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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 218.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 272.8
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 134.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1114.8
Min RPKM: 3.0
Std RPKM: 136.3
Median RPKM: 73.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
1114.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
745.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
712.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
670.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
468.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
453.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
427.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
419.1
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
416.2
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
394.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
365.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
342.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
342.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
316.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
308.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
306.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
294.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
290.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
285.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
273.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
243.1
GTEX-11OF3-1926-SM-59889
60-69 years, male
242.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
234.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
230.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
230.1
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
229.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
227.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
225.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
223.1
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
222.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
217.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
215.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
209.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
197.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
194.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
191.1
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
180.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
178.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
178.4
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
175.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
173.2
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
171.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
170.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
167.8
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
167.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
166.9
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
166.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
165.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
154.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
154.2
GTEX-T6MN-0726-SM-32PML
50-59 years, male
148.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
148.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
147.9
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
145.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
144.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
144.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
142.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
137.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
134.7
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
133.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
133.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
124.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
124.1
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
122.8
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
122.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
121.0
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
118.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
117.1
GTEX-144GM-0926-SM-5O994
20-29 years, male
114.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
113.0
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
112.0
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
109.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
109.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
106.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
105.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
104.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
103.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
102.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
102.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
99.0
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
97.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
96.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
95.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
93.5
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
92.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
91.9
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
91.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
90.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
90.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
90.2
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
89.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
89.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
86.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
85.0
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
84.3
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
82.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
81.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
81.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
80.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
79.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
79.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
78.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
76.4
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
74.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
74.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
73.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
73.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
73.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
71.4
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
70.4
GTEX-13113-1726-SM-5GCOO
60-69 years, female
68.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
68.7
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
68.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
66.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
66.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
65.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
64.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
63.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
63.1
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
62.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
62.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
62.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
62.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
61.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
60.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
59.7
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
57.9
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
57.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
57.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
57.3
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
56.7
GTEX-R55D-0826-SM-48FEA
50-59 years, male
56.3
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
55.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
55.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
54.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
53.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
52.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
52.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
51.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
49.9
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
49.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
48.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
48.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
48.2
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
47.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
46.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
45.4
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
45.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
44.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
44.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
43.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
42.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
42.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
42.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
41.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
41.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
41.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
41.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
39.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
38.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
38.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
38.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
37.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
37.6
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
37.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
36.8
GTEX-S341-1526-SM-4AD6K
40-49 years, female
35.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
34.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
34.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
33.6
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
33.4
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
32.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
32.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
32.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
31.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
31.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
31.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
31.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
30.2
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
28.7
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
26.9
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
26.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
26.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
26.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
25.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
25.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
23.5
GTEX-117YX-1426-SM-5H12H
50-59 years, male
23.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
22.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
22.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
22.3
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
22.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
21.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
20.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
19.0
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
18.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
16.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
16.0
GTEX-1122O-1226-SM-5H113
60-69 years, female
15.8
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
15.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
13.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
13.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
13.1
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
11.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
11.3
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
10.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
9.3
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
9.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
9.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
8.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
8.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
6.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
5.2
GTEX-WFON-1826-SM-3GILG
40-49 years, male
3.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.