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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 607.9
Min RPKM: 49.6
Std RPKM: 100.7
Median RPKM: 207.7
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
607.9
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
475.1
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
420.6
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
412.6
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
373.8
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
373.5
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
373.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
370.0
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
369.6
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
369.0
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
345.5
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
344.4
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
343.3
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
341.7
GTEX-QLQW-0126-SM-447BK
30-39 years, male
334.7
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
333.1
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
333.1
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
323.5
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
321.6
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
304.5
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
299.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
289.8
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
286.7
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
281.8
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
281.1
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
276.1
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
273.3
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
272.6
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
270.3
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
270.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
269.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
263.4
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
263.3
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
262.7
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
262.5
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
262.4
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
256.8
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
256.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
255.5
GTEX-R55G-0226-SM-48FEI
40-49 years, female
255.3
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
252.1
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
246.9
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
246.0
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
240.4
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
240.2
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
236.3
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
225.5
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
225.2
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
225.0
GTEX-144GN-2126-SM-5O99D
50-59 years, male
224.2
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
218.7
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
209.6
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
205.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
204.0
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
197.5
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
196.3
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
195.5
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
192.8
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
187.6
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
183.0
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
182.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
182.4
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
181.7
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
180.4
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
169.3
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
161.7
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
160.6
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
159.6
GTEX-QV31-0126-SM-447BP
30-39 years, male
159.2
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
158.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
154.8
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
151.2
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
151.0
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
150.7
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
148.3
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
147.0
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
145.3
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
144.7
GTEX-13111-0126-SM-5EGHO
50-59 years, male
138.2
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
137.4
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
133.1
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
129.6
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
129.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
122.8
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
122.5
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
115.1
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
113.7
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
111.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
111.1
GTEX-PX3G-0926-SM-48U12
20-29 years, female
105.8
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
104.8
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
103.5
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
102.5
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
98.9
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
98.4
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
95.2
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
93.1
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
90.9
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
88.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
85.4
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
85.0
GTEX-Q734-0226-SM-48U1A
40-49 years, female
70.2
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
54.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
49.6
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.