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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 565.7
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 297.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 149
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1133.7
Min RPKM: 70.6
Std RPKM: 230.0
Median RPKM: 363.5
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
1133.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
1041.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
1005.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
993.6
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
959.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
959.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
953.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
949.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
915.8
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
858.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
837.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
826.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
815.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
803.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
782.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
775.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
774.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
766.9
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
763.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
761.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
756.7
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
754.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
749.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
745.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
739.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
737.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
716.8
GTEX-13113-1726-SM-5GCOO
60-69 years, female
705.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
699.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
699.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
698.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
697.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
696.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
675.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
672.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
669.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
669.7
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
669.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
667.2
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
664.3
GTEX-11OF3-1926-SM-59889
60-69 years, male
663.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
663.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
652.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
651.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
651.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
648.7
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
640.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
640.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
638.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
627.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
619.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
616.3
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
610.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
602.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
601.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
598.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
595.5
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
592.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
577.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
577.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
573.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
564.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
563.3
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
560.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
560.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
548.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
537.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
535.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
527.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
526.9
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
525.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
513.7
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
506.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
504.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
500.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
497.1
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
495.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
480.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
470.6
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
468.5
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
467.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
464.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
463.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
462.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
461.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
460.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
456.2
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
442.6
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
442.1
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
442.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
439.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
437.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
421.6
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
418.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
408.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
408.2
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
407.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
405.0
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
403.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
397.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
395.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
388.0
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
385.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
384.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
382.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
382.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
370.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
356.6
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
356.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
353.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
351.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
350.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
348.7
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
346.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
345.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
342.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
341.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
335.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
335.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
333.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
330.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
328.7
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
323.5
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
322.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
321.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
321.4
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
317.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
315.3
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
315.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
310.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
309.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
305.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
304.0
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
303.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
302.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
298.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
294.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
288.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
287.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
286.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
285.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
285.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
285.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
284.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
282.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
279.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
279.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
278.7
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
278.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
270.3
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
268.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
265.5
GTEX-117YX-1426-SM-5H12H
50-59 years, male
265.1
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
261.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
259.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
258.3
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
256.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
254.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
253.9
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
253.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
249.6
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
249.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
249.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
245.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
245.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
243.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
242.8
GTEX-S341-1526-SM-4AD6K
40-49 years, female
232.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
230.6
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
227.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
227.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
221.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
218.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
217.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
215.8
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
207.3
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
206.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
203.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
203.2
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
202.5
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
200.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
200.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
199.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
199.4
GTEX-1122O-1226-SM-5H113
60-69 years, female
188.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
186.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
179.4
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
176.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
172.7
GTEX-111YS-1926-SM-5GICC
60-69 years, male
165.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
163.5
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
163.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
161.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
159.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
150.0
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
147.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
145.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
143.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
143.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
142.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
135.4
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
133.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
132.7
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
130.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
129.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
126.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
124.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
124.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
111.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
109.9
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
108.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
103.7
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
98.1
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
70.6
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.