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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 308.4
Min RPKM: 7.2
Std RPKM: 62.5
Median RPKM: 32.4
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
308.4
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
278.8
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
219.4
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
210.8
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
208.3
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
202.6
GTEX-11I78-1926-SM-59878
50-59 years, female
194.1
GTEX-QCQG-1426-SM-48U22
50-59 years, female
190.5
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
172.9
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
155.7
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
133.9
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
120.4
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
120.1
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
115.0
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
107.4
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
104.1
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
102.6
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
102.1
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
101.2
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
92.8
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
89.1
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
88.7
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
87.0
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
84.9
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
83.2
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
80.6
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
79.5
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
71.6
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
70.0
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
65.0
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
60.4
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
57.1
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
54.1
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
53.6
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
52.7
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
51.6
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
45.7
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
45.4
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
45.0
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
42.0
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
39.8
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
38.4
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
38.4
GTEX-S32W-1226-SM-4AD67
50-59 years, female
37.0
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
36.9
GTEX-RU72-2226-SM-46MUE
50-59 years, female
35.9
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
35.5
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
34.0
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
32.4
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
32.3
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
29.2
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
29.2
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
28.8
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
28.1
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
27.1
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
26.4
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
26.4
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
25.9
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
25.5
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
25.4
GTEX-S341-0726-SM-4AD5R
40-49 years, female
24.8
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
24.5
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
23.7
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
23.6
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
23.5
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
23.2
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
21.6
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
21.3
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
21.2
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
20.3
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
19.4
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
19.1
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
19.0
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
17.8
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
17.5
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
16.9
GTEX-P78B-1926-SM-3P616
40-49 years, female
16.2
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
15.6
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
14.5
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
14.3
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
14.2
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
14.1
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
12.8
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
12.8
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
12.5
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
11.9
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
11.2
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
10.8
GTEX-Q734-0726-SM-48TZP
40-49 years, female
10.8
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
10.7
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
10.7
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
9.9
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
9.3
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
8.7
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
8.0
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
8.0
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
7.2
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.