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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 461.2
Min RPKM: 24.3
Std RPKM: 101.5
Median RPKM: 169.3
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
461.2
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
456.5
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
446.2
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
403.1
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
399.5
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
396.9
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
385.4
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
375.4
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
348.1
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
341.5
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
339.7
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
323.2
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
318.7
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
310.8
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
307.8
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
293.8
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
283.4
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
283.3
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
273.1
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
271.4
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
264.9
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
259.7
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
250.3
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
247.9
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
245.8
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
244.7
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
244.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
240.4
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
231.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
227.6
GTEX-QV31-0126-SM-447BP
30-39 years, male
227.0
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
225.8
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
225.4
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
222.4
GTEX-QLQW-0126-SM-447BK
30-39 years, male
215.7
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
215.6
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
215.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
212.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
207.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
203.0
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
197.9
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
195.7
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
195.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
192.9
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
187.6
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
173.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
172.9
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
172.3
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
171.4
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
171.3
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
171.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
169.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
169.2
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
163.3
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
162.2
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
157.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
149.2
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
147.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
145.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
141.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
141.1
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
138.7
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
135.3
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
133.1
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
130.5
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
128.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
125.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
120.8
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
119.7
GTEX-PX3G-0926-SM-48U12
20-29 years, female
115.8
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
114.8
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
113.2
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
104.7
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
104.5
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
103.5
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
103.3
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
101.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
101.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
101.1
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
99.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
96.6
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
96.3
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
95.8
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
95.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
92.9
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
90.8
GTEX-Q734-0226-SM-48U1A
40-49 years, female
90.6
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
89.0
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
88.4
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
88.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
81.2
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
80.6
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
79.8
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
73.6
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
72.7
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
67.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
66.2
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
63.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
63.5
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
59.1
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
58.5
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
53.6
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
45.1
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
24.3
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.