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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 271.5
Min RPKM: 55.3
Std RPKM: 44.5
Median RPKM: 144.4
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
271.5
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
269.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
266.2
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
256.0
GTEX-RU72-2226-SM-46MUE
50-59 years, female
224.3
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
222.8
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
220.1
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
217.5
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
216.0
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
215.3
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
214.1
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
202.3
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
194.9
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
194.2
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
191.6
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
190.0
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
187.3
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
182.1
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
180.3
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
179.5
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
178.8
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
178.5
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
173.1
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
173.0
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
169.3
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
168.7
GTEX-Q734-0726-SM-48TZP
40-49 years, female
168.6
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
165.8
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
165.4
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
164.7
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
164.6
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
161.7
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
161.4
GTEX-P78B-1926-SM-3P616
40-49 years, female
160.1
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
160.0
GTEX-S32W-1226-SM-4AD67
50-59 years, female
156.2
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
155.0
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
153.5
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
153.4
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
152.3
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
152.1
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
151.7
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
150.4
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
147.7
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
147.4
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
146.4
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
145.2
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
145.0
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
144.4
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
142.9
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
140.5
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
140.0
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
139.4
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
139.2
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
139.1
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
138.0
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
136.9
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
134.7
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
133.1
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
133.1
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
130.9
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
130.9
GTEX-11I78-1926-SM-59878
50-59 years, female
130.7
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
126.9
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
125.7
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
124.2
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
123.4
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
121.5
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
119.5
GTEX-S341-0726-SM-4AD5R
40-49 years, female
119.3
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
118.9
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
118.8
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
117.6
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
117.3
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
116.1
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
113.6
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
109.4
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
108.8
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
108.3
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
102.7
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
101.5
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
101.1
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
96.3
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
95.6
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
94.7
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
93.2
GTEX-QCQG-1426-SM-48U22
50-59 years, female
92.7
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
92.1
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
92.0
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
91.3
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
91.1
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
90.9
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
90.3
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
88.0
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
86.7
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
66.2
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
55.3
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.