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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 566.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 604.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 316.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 450.7
Min RPKM: 107.8
Std RPKM: 38.7
Median RPKM: 158.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
450.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
338.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
327.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
301.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
280.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
259.8
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
257.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
253.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
239.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
237.8
GTEX-QEL4-2126-SM-447AE
50-59 years, male
228.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
228.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
228.5
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
218.1
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
215.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
214.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
207.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
207.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
202.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
201.5
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
200.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
200.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
197.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
197.7
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
195.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
194.6
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
192.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
192.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
191.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
190.8
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
188.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
188.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
188.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
188.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
187.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
186.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
185.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
184.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
184.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
184.0
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
183.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
183.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
181.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
181.6
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
180.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
180.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
179.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
179.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
179.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
178.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
178.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
177.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
177.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
176.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
176.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
176.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
176.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
176.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
175.8
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
175.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
174.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
174.8
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
174.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
174.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
173.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
173.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
173.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
173.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
173.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
172.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
172.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
171.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
170.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
168.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
167.5
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
167.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
166.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
166.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
166.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
165.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
165.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
164.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
164.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
164.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
164.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
163.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
163.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
163.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
163.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
162.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
162.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
162.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
161.8
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
161.6
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
161.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
160.7
GTEX-111YS-1926-SM-5GICC
60-69 years, male
160.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
160.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
160.1
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
159.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
159.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
159.4
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
158.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
158.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
158.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
158.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
158.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
157.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
157.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
157.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
157.1
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
157.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
156.9
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
156.6
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
156.5
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
156.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
156.2
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
155.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
155.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
154.8
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
154.7
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
154.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
154.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
154.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
154.1
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
154.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
154.0
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
153.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
153.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
153.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
153.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
152.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
152.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
152.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
152.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
151.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
151.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
150.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
150.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
150.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
150.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
149.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
149.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
149.4
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
149.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
149.1
GTEX-TML8-1226-SM-32QON
40-49 years, female
148.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
148.3
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
148.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
148.0
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
147.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
147.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
147.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
147.4
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
147.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
147.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
146.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
146.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
146.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
145.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
145.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
145.2
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
144.9
GTEX-117XS-1926-SM-5GICO
60-69 years, male
144.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
144.1
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
143.9
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
143.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
143.5
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
143.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
142.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
141.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
141.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
140.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
140.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
140.1
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
140.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
139.9
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
139.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
138.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
138.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
138.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
138.1
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
137.5
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
137.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
137.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
136.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
135.6
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
135.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
135.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
134.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
133.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
132.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
131.7
GTEX-117YX-1426-SM-5H12H
50-59 years, male
131.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
131.1
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
130.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
130.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
129.9
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
129.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
129.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
127.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
127.4
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
127.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
126.7
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
125.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
125.3
GTEX-144GM-0926-SM-5O994
20-29 years, male
125.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
120.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
117.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
116.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
114.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
110.5
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
108.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
107.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.