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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 818.5
Min RPKM: 22.4
Std RPKM: 172.0
Median RPKM: 235.7
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
818.5
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
802.7
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
763.7
GTEX-R55G-0226-SM-48FEI
40-49 years, female
729.5
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
699.9
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
573.6
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
553.6
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
539.6
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
530.0
GTEX-QCQG-0226-SM-48U28
50-59 years, female
509.8
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
489.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
459.1
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
447.6
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
445.5
GTEX-QLQW-0126-SM-447BK
30-39 years, male
441.8
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
439.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
432.5
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
429.7
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
420.5
GTEX-X585-1826-SM-4QAS3
50-59 years, male
401.1
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
354.9
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
353.1
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
331.6
GTEX-144GN-2126-SM-5O99D
50-59 years, male
326.7
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
323.3
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
315.6
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
296.7
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
295.1
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
293.5
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
292.2
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
290.2
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
280.8
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
275.7
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
273.7
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
273.6
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
272.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
270.9
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
264.1
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
262.0
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
257.7
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
254.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
250.6
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
250.4
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
245.0
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
243.4
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
242.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
242.6
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
240.7
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
239.0
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
237.9
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
237.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
236.6
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
234.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
233.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
226.2
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
226.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
222.9
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
218.6
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
209.4
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
208.9
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
204.0
GTEX-13111-0126-SM-5EGHO
50-59 years, male
200.0
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
196.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
194.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
193.0
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
186.8
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
185.9
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
181.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
181.4
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
179.0
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
168.8
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
163.7
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
158.5
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
158.1
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
154.3
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
147.8
GTEX-QV31-0126-SM-447BP
30-39 years, male
143.9
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
137.2
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
136.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
134.8
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
134.1
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
116.8
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
106.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
100.6
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
99.3
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
96.4
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
90.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
84.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
83.9
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
83.3
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
77.1
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
76.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
73.3
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
71.2
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
69.1
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
65.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
60.3
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
58.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
52.9
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
51.8
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
37.9
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
35.1
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
29.9
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
22.4
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.