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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 5104
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 1860.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 1665.9
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 5148.4
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 5358
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 4636.6
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 4000.1
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 7407
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 6050
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 7416.7
Min RPKM: 317.3
Std RPKM: 1477.1
Median RPKM: 4007.9
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
7416.7
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
7390.1
GTEX-11OF3-1826-SM-5987N
60-69 years, male
7361.5
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
7166.0
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
7038.3
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
6443.5
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
6386.1
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
6366.6
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
6311.8
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
6310.1
GTEX-S95S-1126-SM-4B64E
60-69 years, male
6187.5
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
6138.6
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
6069.0
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
6000.7
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
5837.4
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
5774.1
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
5765.9
GTEX-13112-0226-SM-5P9IV
50-59 years, male
5743.7
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
5737.2
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
5716.9
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
5699.8
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
5691.7
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
5685.1
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
5632.7
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
5628.2
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
5569.5
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
5490.4
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
5400.2
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
5344.3
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
5335.3
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
5308.7
GTEX-13111-1526-SM-5EGJX
50-59 years, male
5192.7
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
5144.9
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
5131.8
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
5111.4
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
5067.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
5029.5
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
4995.8
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
4982.2
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
4968.4
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
4959.1
GTEX-REY6-0126-SM-48FDT
60-69 years, male
4944.9
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
4930.5
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
4876.6
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
4865.7
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
4855.6
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
4855.1
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
4760.3
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
4729.9
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
4721.7
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
4716.6
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
4705.9
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
4660.3
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
4608.6
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
4598.6
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
4564.8
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
4541.9
GTEX-11DXZ-2126-SM-59881
50-59 years, male
4535.4
GTEX-117XS-2026-SM-5GID1
60-69 years, male
4534.1
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
4520.3
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
4518.7
GTEX-V955-1926-SM-4KL1L
60-69 years, male
4477.1
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
4476.3
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
4453.9
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
4448.9
GTEX-Y111-2426-SM-4TT23
50-59 years, male
4416.2
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
4395.1
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
4394.7
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
4388.0
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
4377.4
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
4357.6
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
4338.3
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
4332.6
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
4331.7
GTEX-12696-0226-SM-5EGL3
60-69 years, male
4320.6
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
4283.4
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
4255.1
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
4225.7
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
4223.8
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
4183.1
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
4154.5
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
4143.6
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
4134.9
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
4084.5
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
4030.5
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
4016.5
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
3999.3
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
3964.9
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
3936.7
GTEX-R55C-1426-SM-48FED
40-49 years, male
3920.6
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
3915.1
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
3885.2
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
3868.5
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
3842.6
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
3842.2
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
3842.1
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
3827.9
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
3782.3
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
3779.1
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
3746.3
GTEX-R55D-0126-SM-48FEL
50-59 years, male
3743.2
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
3736.2
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
3661.6
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
3635.6
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
3625.8
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
3601.5
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
3550.8
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
3525.7
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
3513.8
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
3498.2
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
3497.9
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
3440.4
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
3376.3
GTEX-XPT6-1626-SM-4B655
20-29 years, male
3361.9
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
3342.5
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
3315.8
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
3267.7
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
3258.8
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
3256.4
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
3232.4
GTEX-QLQW-1026-SM-447A9
30-39 years, male
3210.8
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
3188.1
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
3137.3
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
3135.8
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
3117.9
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
3108.6
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
3103.7
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
3080.0
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
3072.4
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
3053.5
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
3050.3
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
2987.9
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
2921.1
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
2837.6
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
2809.6
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
2805.2
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
2795.1
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
2746.4
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
2683.2
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
2599.2
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
2593.2
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
2456.8
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
2417.8
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
2381.4
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
2334.1
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
2178.2
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
2165.0
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
2154.4
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
2144.4
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
2077.0
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
1933.1
GTEX-X261-2326-SM-4PQYU
50-59 years, male
1896.5
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
1871.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
1837.5
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
1815.8
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
1783.5
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
1728.1
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
1619.6
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
1582.9
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
1582.3
GTEX-S33H-0126-SM-4AD62
30-39 years, male
1568.5
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
1560.1
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
1475.9
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
1467.6
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
1429.4
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
1421.2
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
1218.5
GTEX-RN64-2326-SM-48FDW
50-59 years, male
1058.0
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
870.8
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
790.8
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
484.1
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
317.3
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.