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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 185.7
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 175.8
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 246.3
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 168.2
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 179.1
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 179
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 184.4
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 165.1
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 188.4
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 367.3
Min RPKM: 143.1
Std RPKM: 30.7
Median RPKM: 195.1
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
367.3
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
357.3
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
281.9
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
279.3
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
270.1
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
268.4
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
247.1
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
246.8
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
242.6
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
242.5
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
241.3
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
235.1
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
232.5
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
232.4
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
231.7
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
228.6
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
227.4
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
224.8
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
224.5
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
223.5
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
223.3
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
223.1
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
221.9
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
221.6
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
221.6
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
221.4
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
221.3
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
219.8
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
219.8
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
219.4
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
219.1
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
218.2
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
218.1
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
218.1
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
218.0
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
217.7
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
217.7
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
216.9
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
216.6
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
216.0
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
215.5
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
214.7
GTEX-13112-0226-SM-5P9IV
50-59 years, male
214.5
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
213.7
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
213.5
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
212.7
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
212.7
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
212.4
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
211.5
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
210.8
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
210.6
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
210.1
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
210.1
GTEX-117XS-2026-SM-5GID1
60-69 years, male
209.3
GTEX-13111-1526-SM-5EGJX
50-59 years, male
208.9
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
208.2
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
207.7
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
207.6
GTEX-V955-1926-SM-4KL1L
60-69 years, male
207.0
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
206.8
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
206.1
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
205.7
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
205.2
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
205.2
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
205.1
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
204.7
GTEX-REY6-0126-SM-48FDT
60-69 years, male
204.0
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
203.3
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
203.1
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
202.5
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
202.1
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
201.8
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
201.8
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
201.0
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
200.8
GTEX-X261-2326-SM-4PQYU
50-59 years, male
200.4
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
199.8
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
199.8
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
199.7
GTEX-11OF3-1826-SM-5987N
60-69 years, male
198.8
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
198.1
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
197.6
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
196.7
GTEX-S95S-1126-SM-4B64E
60-69 years, male
195.7
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
195.5
GTEX-R55C-1426-SM-48FED
40-49 years, male
195.2
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
195.0
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
194.1
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
194.0
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
194.0
GTEX-R55D-0126-SM-48FEL
50-59 years, male
193.8
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
193.8
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
193.6
GTEX-QLQW-1026-SM-447A9
30-39 years, male
193.2
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
192.8
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
192.8
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
192.3
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
191.9
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
191.7
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
191.3
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
190.9
GTEX-XPT6-1626-SM-4B655
20-29 years, male
190.9
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
190.8
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
190.1
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
189.0
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
188.6
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
188.3
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
188.1
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
188.1
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
188.0
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
187.6
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
186.2
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
185.4
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
185.1
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
185.0
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
184.2
GTEX-RN64-2326-SM-48FDW
50-59 years, male
184.2
GTEX-S33H-0126-SM-4AD62
30-39 years, male
183.9
GTEX-11DXZ-2126-SM-59881
50-59 years, male
183.4
GTEX-12696-0226-SM-5EGL3
60-69 years, male
183.4
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
183.4
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
182.2
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
181.8
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
181.6
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
181.0
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
179.0
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
178.7
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
178.2
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
177.8
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
177.5
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
176.7
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
176.5
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
176.5
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
176.5
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
176.4
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
176.2
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
175.5
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
175.3
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
175.0
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
174.1
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
174.0
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
173.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
173.3
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
172.8
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
172.1
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
172.0
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
171.9
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
170.6
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
168.9
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
168.9
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
168.8
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
168.6
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
168.3
GTEX-Y111-2426-SM-4TT23
50-59 years, male
167.0
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
166.4
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
166.3
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
165.1
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
164.6
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
161.4
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
159.8
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
159.7
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
159.1
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
158.7
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
156.9
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
155.5
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
154.7
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
154.3
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
154.3
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
152.7
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
147.4
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
145.4
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
143.1
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.