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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 635.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 544.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 840.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1514.6
Min RPKM: 327.0
Std RPKM: 162.5
Median RPKM: 546.3
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1514.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1351.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1121.6
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1089.1
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
1014.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
1005.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
987.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
911.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
907.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
879.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
848.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
823.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
822.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
819.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
817.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
817.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
803.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
795.6
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
781.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
773.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
772.0
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
768.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
764.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
758.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
748.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
747.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
737.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
730.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
725.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
721.7
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
716.9
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
716.5
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
710.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
703.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
701.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
690.8
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
690.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
685.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
683.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
677.2
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
672.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
672.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
672.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
671.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
671.7
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
671.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
665.3
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
664.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
661.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
659.3
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
654.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
654.6
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
653.5
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
651.8
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
651.2
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
648.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
647.4
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
641.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
640.9
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
638.7
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
638.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
627.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
627.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
624.1
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
622.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
622.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
621.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
618.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
615.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
608.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
606.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
604.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
603.8
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
602.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
596.6
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
595.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
594.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
590.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
588.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
588.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
588.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
588.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
585.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
582.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
581.4
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
581.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
579.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
579.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
576.7
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
573.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
572.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
570.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
566.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
566.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
565.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
565.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
558.1
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
557.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
557.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
555.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
553.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
552.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
550.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
550.3
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
549.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
548.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
547.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
545.5
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
544.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
544.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
543.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
541.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
540.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
540.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
540.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
539.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
537.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
536.9
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
536.6
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
535.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
534.6
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
534.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
533.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
532.6
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
532.4
GTEX-XBED-1626-SM-47JYN
60-69 years, male
531.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
528.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
528.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
528.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
528.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
527.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
527.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
525.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
524.5
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
522.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
522.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
515.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
513.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
513.8
GTEX-111YS-1926-SM-5GICC
60-69 years, male
510.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
509.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
509.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
506.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
504.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
501.6
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
501.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
500.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
499.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
498.7
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
497.5
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
496.8
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
495.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
495.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
493.2
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
489.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
489.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
488.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
479.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
478.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
478.3
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
474.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
473.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
471.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
470.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
465.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
465.5
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
462.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
459.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
458.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
457.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
454.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
453.2
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
451.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
450.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
450.0
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
448.2
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
446.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
446.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
446.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
440.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
440.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
440.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
440.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
439.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
437.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
431.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
430.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
426.9
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
424.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
421.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
421.5
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
419.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
417.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
414.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
413.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
410.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
410.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
406.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
404.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
403.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
400.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
399.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
392.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
380.7
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
378.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
371.9
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
365.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
364.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
359.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
351.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
351.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
336.4
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
332.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
327.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.