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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 383.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 450.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 680.1
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 379.3
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 265.9
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 295.9
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 92.5
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 310.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 199.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 415.4
Min RPKM: 51.9
Std RPKM: 68.1
Median RPKM: 181.0
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
415.4
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
411.7
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
396.0
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
384.3
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
348.2
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
347.9
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
329.8
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
327.3
GTEX-X261-2326-SM-4PQYU
50-59 years, male
319.6
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
319.3
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
316.1
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
309.7
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
304.9
GTEX-S33H-0126-SM-4AD62
30-39 years, male
304.3
GTEX-RN64-2326-SM-48FDW
50-59 years, male
302.1
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
295.8
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
292.7
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
292.3
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
289.3
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
278.3
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
278.2
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
276.4
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
275.4
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
274.2
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
274.0
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
270.1
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
267.8
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
264.4
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
257.1
GTEX-R55D-0126-SM-48FEL
50-59 years, male
256.3
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
253.1
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
250.6
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
245.5
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
245.4
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
244.6
GTEX-XPT6-1626-SM-4B655
20-29 years, male
239.0
GTEX-12696-0226-SM-5EGL3
60-69 years, male
234.0
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
231.5
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
231.4
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
229.5
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
229.0
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
227.4
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
223.3
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
220.9
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
219.9
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
219.4
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
217.6
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
216.0
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
215.0
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
214.5
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
214.1
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
213.3
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
212.4
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
211.3
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
211.0
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
211.0
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
208.8
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
208.3
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
207.9
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
206.0
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
205.5
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
204.9
GTEX-11OF3-1826-SM-5987N
60-69 years, male
204.0
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
203.5
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
201.7
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
200.7
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
200.5
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
200.2
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
198.0
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
197.8
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
196.5
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
195.5
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
195.2
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
194.5
GTEX-11DXZ-2126-SM-59881
50-59 years, male
190.2
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
190.2
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
189.2
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
187.2
GTEX-R55C-1426-SM-48FED
40-49 years, male
186.6
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
186.6
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
186.4
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
183.6
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
183.2
GTEX-QLQW-1026-SM-447A9
30-39 years, male
182.8
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
182.0
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
181.2
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
180.9
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
180.5
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
179.0
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
178.8
GTEX-V955-1926-SM-4KL1L
60-69 years, male
178.0
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
177.0
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
177.0
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
175.5
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
172.7
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
171.7
GTEX-S95S-1126-SM-4B64E
60-69 years, male
170.2
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
169.9
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
169.8
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
169.7
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
169.4
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
168.0
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
167.5
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
167.1
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
166.1
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
165.8
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
165.6
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
165.4
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
165.2
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
165.0
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
160.5
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
160.3
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
160.0
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
159.9
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
157.8
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
157.7
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
157.6
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
157.6
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
157.1
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
156.8
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
155.6
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
154.9
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
153.8
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
152.9
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
152.8
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
152.0
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
151.9
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
150.9
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
150.5
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
150.4
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
148.4
GTEX-117XS-2026-SM-5GID1
60-69 years, male
146.4
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
146.4
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
146.1
GTEX-REY6-0126-SM-48FDT
60-69 years, male
145.3
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
145.0
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
143.1
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
137.7
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
134.8
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
132.7
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
131.6
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
130.0
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
129.5
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
128.3
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
127.5
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
126.4
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
125.4
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
125.0
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
123.7
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
121.5
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
119.8
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
119.4
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
118.9
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
117.8
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
117.5
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
112.9
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
110.8
GTEX-13111-1526-SM-5EGJX
50-59 years, male
107.5
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
107.5
GTEX-13112-0226-SM-5P9IV
50-59 years, male
106.9
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
106.0
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
103.7
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
103.0
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
102.8
GTEX-Y111-2426-SM-4TT23
50-59 years, male
101.2
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
100.9
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
93.5
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
92.0
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
91.1
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
81.3
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
63.0
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
51.9
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.