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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1030.5
Min RPKM: 316.1
Std RPKM: 160.4
Median RPKM: 557.0
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
1030.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
976.8
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
976.3
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
944.1
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
942.9
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
922.1
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
880.9
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
849.0
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
832.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
829.0
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
815.4
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
811.7
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
808.2
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
801.3
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
771.0
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
764.6
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
755.9
GTEX-QV31-0126-SM-447BP
30-39 years, male
741.2
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
732.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
727.4
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
715.0
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
706.8
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
703.9
GTEX-144GN-2126-SM-5O99D
50-59 years, male
701.4
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
689.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
688.3
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
684.0
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
683.7
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
680.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
679.0
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
675.5
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
665.4
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
654.7
GTEX-Q734-0226-SM-48U1A
40-49 years, female
652.6
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
651.5
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
647.9
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
626.6
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
617.6
GTEX-13111-0126-SM-5EGHO
50-59 years, male
611.9
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
608.6
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
599.9
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
594.7
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
594.0
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
589.8
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
587.5
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
583.4
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
576.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
574.1
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
565.3
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
560.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
560.7
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
558.1
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
555.9
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
554.6
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
553.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
533.3
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
529.3
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
524.9
GTEX-QLQW-0126-SM-447BK
30-39 years, male
524.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
523.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
522.6
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
521.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
521.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
520.2
GTEX-QCQG-0226-SM-48U28
50-59 years, female
517.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
517.2
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
515.4
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
510.1
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
509.8
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
507.7
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
499.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
497.2
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
496.1
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
493.7
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
487.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
481.5
GTEX-R55G-0226-SM-48FEI
40-49 years, female
474.7
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
473.0
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
469.1
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
467.6
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
455.0
GTEX-PX3G-0926-SM-48U12
20-29 years, female
454.5
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
454.5
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
451.0
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
443.5
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
436.8
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
434.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
431.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
425.3
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
420.2
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
419.7
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
418.0
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
404.8
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
402.0
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
395.1
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
390.4
GTEX-X585-1826-SM-4QAS3
50-59 years, male
389.1
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
378.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
376.0
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
356.9
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
348.4
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
346.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
327.3
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
316.1
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.