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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 188.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 328.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 45.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1043.2
Min RPKM: 100.1
Std RPKM: 96.4
Median RPKM: 217.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
1043.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
815.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
658.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
521.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
421.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
388.1
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
378.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
369.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
363.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
356.7
GTEX-117YX-1426-SM-5H12H
50-59 years, male
346.1
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
344.4
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
344.0
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
338.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
338.6
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
337.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
331.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
330.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
323.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
318.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
314.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
313.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
303.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
300.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
297.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
297.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
295.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
295.2
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
295.0
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
290.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
288.3
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
286.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
283.7
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
279.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
274.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
274.2
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
273.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
270.4
GTEX-13113-1726-SM-5GCOO
60-69 years, female
269.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
269.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
267.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
267.3
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
264.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
264.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
264.2
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
262.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
262.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
261.5
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
260.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
254.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
253.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
252.9
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
252.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
252.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
252.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
251.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
250.9
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
250.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
249.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
248.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
247.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
246.6
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
246.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
246.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
243.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
242.6
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
242.6
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
242.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
241.3
GTEX-144GM-0926-SM-5O994
20-29 years, male
241.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
241.3
GTEX-S341-1526-SM-4AD6K
40-49 years, female
240.9
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
239.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
237.8
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
236.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
235.3
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
234.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
234.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
233.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
232.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
230.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
230.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
229.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
229.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
228.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
228.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
226.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
226.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
226.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
226.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
225.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
224.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
224.5
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
224.4
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
223.9
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
223.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
222.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
222.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
222.7
GTEX-R53T-1526-SM-48FEK
50-59 years, female
221.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
221.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
220.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
220.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
220.0
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
218.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
218.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
217.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
217.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
216.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
214.9
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
214.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
213.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
213.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
212.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
212.0
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
211.3
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
210.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
209.6
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
209.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
209.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
209.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
208.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
207.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
204.4
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
203.2
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
201.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
200.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
197.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
197.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
197.4
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
196.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
196.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
194.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
194.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
194.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
193.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
193.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
192.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
192.6
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
192.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
192.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
190.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
190.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
189.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
189.2
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
189.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
188.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
188.4
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
187.3
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
186.8
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
186.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
184.9
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
183.4
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
182.9
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
182.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
181.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
181.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
181.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
179.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
178.5
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
178.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
176.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
176.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
175.0
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
174.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
172.6
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
172.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
172.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
172.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
171.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
171.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
171.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
169.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
166.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
166.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
165.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
165.3
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
165.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
165.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
164.8
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
164.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
164.0
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
162.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
161.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
161.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
160.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
159.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
158.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
157.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
155.4
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
155.3
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
154.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
154.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
154.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
153.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
150.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
150.5
GTEX-111YS-1926-SM-5GICC
60-69 years, male
149.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
148.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
147.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
146.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
146.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
144.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
143.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
143.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
142.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
137.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
136.1
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
130.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
128.9
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
125.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
121.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
121.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
100.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.