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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 135.6
Min RPKM: 0.4
Std RPKM: 27.9
Median RPKM: 30.3
GTEX-111YS-1426-SM-5GID8
60-69 years, male
135.6
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
101.5
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
87.2
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
83.3
GTEX-1122O-1326-SM-5H11F
60-69 years, female
82.6
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
74.3
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
74.3
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
74.1
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
71.7
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
71.5
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
68.9
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
68.6
GTEX-ZTSS-0926-SM-59865
40-49 years, male
65.7
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
65.0
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
63.6
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
62.4
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
62.2
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
59.9
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
59.8
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
58.4
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
56.9
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
55.5
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
55.1
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
53.8
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
53.3
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
53.3
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
50.8
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
49.9
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
48.1
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
47.2
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
46.7
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
45.9
GTEX-13113-1226-SM-5EGHT
60-69 years, female
45.2
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
41.9
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
41.6
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
37.7
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
37.0
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
34.9
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
34.5
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
33.1
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
32.1
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
31.7
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
30.8
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
30.7
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
29.9
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
29.8
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
28.5
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
28.3
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
28.2
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
27.5
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
27.0
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
26.2
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
26.0
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
25.8
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
24.3
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
23.6
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
23.5
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
23.4
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
21.9
GTEX-13O61-1326-SM-5KM31
60-69 years, male
17.7
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
16.0
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
15.5
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
15.2
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
7.8
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
7.5
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
6.6
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
6.4
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
6.3
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
6.2
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
6.1
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
5.6
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
4.9
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
4.8
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
4.2
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
3.9
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
3.0
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
2.5
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
2.4
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
2.0
GTEX-117YX-0326-SM-5GICL
50-59 years, male
1.7
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
1.7
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
1.0
GTEX-13111-1426-SM-5DUW3
50-59 years, male
0.9
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
0.9
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
0.8
GTEX-1192X-2526-SM-59868
50-59 years, male
0.5
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
0.5
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
0.4
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
